Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1114 ATGGATGTCTCAAGTAGTAGTAATAGCTTGATCTATGTACTGCTGTTGTTTGCATTCTGTGAAATGCAAATGATTGTAGGAAAAGACACTCTAACATGCCCCATCCGCAGAAGTCCATGCTTTGGGAAGAAAGTGCCATGCCCTTCTCAGTGCCCTCTTAAATCGCCATCAGACCCAAAAGCCAAAGTCTGCTTTCTCGACTGTGATTCTCCCACATGCGAAACTCAGTGCAAAACTCGCAAACCAAATTGCAATGGTCGTGGATCAGCATGCCTAGACCCTCGTTTCGTCGGAGCAGACGGGATTGTGTTCTACTTCCATGGAAGAAGAAACGAGAATTTCGCCTTAGTATCCGACATAAACCTCCAAATCAACGCACGCTTCATTGGCCTGAGGCCAGCAACCCGAACAAGAGACTACACATGGATTCAAGCACTTGGAATCCTTCATGGCTCTCAGAGCTTCACCATTGAGGCCACCCCATCACCAACATGGGACGATGAAGTTGACCACTTGAGATTCTCTCACAATGGCAAAGAACTAGCCATCCCAGATGGCTACCTCAACACTTACCAGTCCTCACAGAATCATCATCTCAGAATAGAGAGAACATCGAGAAAGAACAGTGTTACTATAACTATCCCAGAAGTTGTTGAAATCTCTATCAATGTTGTTCCTGTGACTAAAGAAGATAGTAGAGTTCACAACTACCAGATTCCTGATGATGATTGTTTTGCTCACTTGGAGGTTCAATTCAAATTTCATGGATTATCTTCCAAAGTTGAAGGGGTTCTTGGAAGGACTTATCAGCCTGATTTTCAGAATCCTGCGAAGGTGGGAGTGGCAATGCCTGTGGTTGGAGGGGAAGACAAGTACAGAACCACATCGCTTGTTTCTGCTGATTGTGGGGTTTGTTTGTTTGCTACAAAAGAAGGTTCTTCAGAGAAGATCATGAACTCTCTGAGTGAATATGGTGTGATGGATTGCACTGGTGTTGCCAACGGTGGGAACGGTATAGTTTGCAGAAGATGA 1032 0.4477 MDVSSSSNSLIYVLLLFAFCEMQMIVGKDTLTCPIRRSPCFGKKVPCPSQCPLKSPSDPKAKVCFLDCDSPTCETQCKTRKPNCNGRGSACLDPRFVGADGIVFYFHGRRNENFALVSDINLQINARFIGLRPATRTRDYTWIQALGILHGSQSFTIEATPSPTWDDEVDHLRFSHNGKELAIPDGYLNTYQSSQNHHLRIERTSRKNSVTITIPEVVEISINVVPVTKEDSRVHNYQIPDDDCFAHLEVQFKFHGLSSKVEGVLGRTYQPDFQNPAKVGVAMPVVGGEDKYRTTSLVSADCGVCLFATKEGSSEKIMNSLSEYGVMDCTGVANGGNGIVCRR 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1114 343 Pfam Root cap 251 307 IPR009646 -
Aed5g1114 343 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 7 343 - -
Aed5g1114 343 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) PROTEIN-LIKE PROTEIN 7 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1114 Aed-Chr5 9427932 9429395 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1114 - - gmx:100808294 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1114 5 9427932 9429395 Aed5g1114 5 9427932 9429395 ECH