Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1110 ATGGAAACCCCGGTTTCGAATGGATCGGTTTCAAAGAAGCGTTCGCTGAGGAGGAAGGTGAATTCGAGGAACTATGATGAGGATCTGATGGATGAGTTGTTTGAGAAGCAGTTGGGGGGTGGTTTGAAGAAGAGGAGTAGGACTAAGGAGGATTTGGAGAAGGAGACCGAGACCGAGGCTATGATTGCAATGTCGCTCGGTTTTCCCATTGATGCTTTGCTCGACGAGGAGATTAAGGCTGGGGTTGTGAGGCAGTTGGGTGGGAAGGAGCAGAATGATTATATTGTCATAAGGAATCATATATTGGCTCTGTGGAGGAGGGGGAATGTCAGGCTGTGGTTGAGTAAAGGGATGGTTAGAGAAACCGTGAGTAATGAGTATGAGCATTTGATTAATTCTGCTTATGACTACCTCTTGTATAACGGCTACATCAATTTCGGGGTTTCGCCCGCGTTTACTTCTCAGTTGGCTGAGTCAACTGAGGGGAGTGCGGTTGTTATTGGTGCTGGCCTTGCCGGGTTGGCAGCGGCAAGGCAGCTCTTGTCGTTTGGTTACAAGGTTGTGGTTTTGGAAGGCAGGAGCCGGCCTGGTGGTCGAGTTTATACTCAGAAGGTGGGGGGTGAGGGTAAGTTTGCTGCCATTGATCTTGGCGGGAGTATTATCACTGGCATTCATGCTAACCCTTTAGGAGTTCTGGCTCGACAGCTTTCTATACCACTTCATAAAGTCAGAGATGATTGCCCTTTGTATAAGCCAGATGGGGCGCCGGTTGATAAGGAAATAGATGCAAGCGTTGAAATCGTATTTAATAGGTTGCTTGACAGGGTTATGGAGTTGAGGCAAATTATGGGTGGGTTTGCAAGTGATACCTCGCTTGGTTCGGTCTTGGAGACACTCAGGCGGTTGTATAATGTGACCCGAAGTACTGATGAGAAGCAGTTGCTTGATTGGCATCTTGCGAATTTGGAATACGCAAATGCTGGGTGCCTTTCAAATCTTTCAGCTGCCTATTGGGATCAGGATGATCCTTATGAAATGAGTGGTGATCACTGCTTTCTGGCTGGAGGCAATACGAGGTTGATAAAAGCTTTATGTGAAGGAGTTCCTATTTTTTATGGAGTGACCGTCAATACTATCAGATATGGAAAGGAGGGTGTTGAGGTTATTGCTGGGGACCAAGTCTTTCAAGCCGATATAGCCTTATGCACTGTGCCTCTTGGAGTTCTGAAAAAGAAGGCCATCAGTTTTGAACCTGAATTGCCTGCAAGGAAATTGGCAGTAATTGAGAAGATGGGGTTTGGGCTGCTGAACAAAGTTGCTATGGTTTTTCCTTATGTGTTTTGGGGGGAAGATCGGGACACATTTGGATGTCTCAATGAATATAGTCATCAGCGTGGGGAATTTTTCCTATTTTACTGTTACCATACAGTTTCTGGAGGTCCAGCACTTGTTGCGCTGGTGGCTGGTGAAGCCGCACAAGCCTTTGAATCCACAGATCCTTCCATTTTGCTCCATCGGGTTTTGTCTGTTTTAAAAGGAATATTTCATCCTAAAGGCATCATTGTGCCTGATCCAATACAGTCAATTTGTACAAGATGGGGCAGTGATCCCCTTGCGTATGGTTCCTACTCTCATGTTAGTGTGAATTCATCTGGTGCTGATTATGATATACTCGCTGAAAATGTGGGGAACCGGTTGTTCTTTGCTGGCGAGGCCACTTGTAGGCAATATCCAGCAACCATGCATGGTGCTTTCTTAAGTGGCCTGAGGGAAGCATCATGCATTTACAGATCAGCTCGGCTTCAAAACAATCCTAAGAAGTACATGCCAAAGAATATCGGACCAAACATTGATATCCTGGTGGATTTATTCAAGAGGCCTGATGTGGAATGTGGGAAGTTTGCTTTCATATTTTTTTCCTCACCAGAAAATCTGCCGTCAATGGGGCTTCTGCAAGTCACTATTGGTGATGCAGAAGAAATTTGCGAGGAGCTGTTAAGCAGCTACCCAAATCCAACAAAGTGGCCCTTGCAGCTGTACACTCCAATATCCCGTGAACAAGCCCAGCAGCTACAAGAAGTTGAGGGAGGGAATGGAAGCAGGCTATCATTTTTGGTAAAAAGTCTTGGGTTAAAGCTTATGGGGCCAAATGCTTTGTTTACTGCAAGTAACACATTGATTGCTAGCATTGCTCATTCACGAAAAGGCCGGTGGAGGAACCGTGCAATTACTTATTAA 2238 0.4576 METPVSNGSVSKKRSLRRKVNSRNYDEDLMDELFEKQLGGGLKKRSRTKEDLEKETETEAMIAMSLGFPIDALLDEEIKAGVVRQLGGKEQNDYIVIRNHILALWRRGNVRLWLSKGMVRETVSNEYEHLINSAYDYLLYNGYINFGVSPAFTSQLAESTEGSAVVIGAGLAGLAAARQLLSFGYKVVVLEGRSRPGGRVYTQKVGGEGKFAAIDLGGSIITGIHANPLGVLARQLSIPLHKVRDDCPLYKPDGAPVDKEIDASVEIVFNRLLDRVMELRQIMGGFASDTSLGSVLETLRRLYNVTRSTDEKQLLDWHLANLEYANAGCLSNLSAAYWDQDDPYEMSGDHCFLAGGNTRLIKALCEGVPIFYGVTVNTIRYGKEGVEVIAGDQVFQADIALCTVPLGVLKKKAISFEPELPARKLAVIEKMGFGLLNKVAMVFPYVFWGEDRDTFGCLNEYSHQRGEFFLFYCYHTVSGGPALVALVAGEAAQAFESTDPSILLHRVLSVLKGIFHPKGIIVPDPIQSICTRWGSDPLAYGSYSHVSVNSSGADYDILAENVGNRLFFAGEATCRQYPATMHGAFLSGLREASCIYRSARLQNNPKKYMPKNIGPNIDILVDLFKRPDVECGKFAFIFFSSPENLPSMGLLQVTIGDAEEICEELLSSYPNPTKWPLQLYTPISREQAQQLQEVEGGNGSRLSFLVKSLGLKLMGPNALFTASNTLIASIAHSRKGRWRNRAITY 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1110 745 PANTHER FLAVIN MONOAMINE OXIDASE 38 737 - -
Aed5g1110 745 Gene3D - 165 593 IPR036188 -
Aed5g1110 745 Pfam SWIRM domain 71 146 IPR007526 GO:0005515
Aed5g1110 745 SUPERFAMILY FAD/NAD(P)-binding domain 162 596 IPR036188 -
Aed5g1110 745 Gene3D - 58 158 IPR036388 -
Aed5g1110 745 SUPERFAMILY Homeodomain-like 55 156 IPR009057 -
Aed5g1110 745 SUPERFAMILY FAD-linked reductases, C-terminal domain 432 545 - -
Aed5g1110 745 PANTHER LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 2 38 737 - -
Aed5g1110 745 Gene3D - 246 551 - -
Aed5g1110 745 ProSiteProfiles SWIRM domain profile. 53 155 IPR007526 GO:0005515
Aed5g1110 745 Pfam Flavin containing amine oxidoreductase 171 595 IPR002937 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1110 Aed-Chr5 9404470 9411701 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-SWI3 Aed5g1110 Amino_oxidase 4.1e-87 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1110 - - gmx:100809901 1331.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1110 5 9404470 9411701 Aed5g1110 5 9404470 9411701 ECH