Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1108 ATGTGCATTGTAGACAGCGCCATCATCTCTGCTTATTATCCTATTCGACCTTCCACTCGAATGGCTACCTTTCCTCTCAATGTTATCAACACTCATCATACCATTGCTAGCAGTCCCTTTGTGCCAGAGGTTGTAAAAGCAGTGGATGCCTTGCATTCAGAGTTCAGGGCTGTGGATAATTTGGTTGCGTGCAATACCACCCGTGTCCTTAAAGCTTTCCAGAAGGCTCGAGTTGGATCTCATCACTTTAGTGGTTGCACTGGGTATGGTCATGATGAAGCTGGGGGCCGTGGGGCTCTTGACCAGGCTTTTGCAGAAATTTTTGGGGCCGAGTCAGCTATTTTCTTCTCAGGTACTCATGCTATCACATGTGCTTTATTTGCTCTGCTGAGGCCAGGGGATGAGCTTTTGGCAGTTGCTGGTGCTCCCTATGACACGCTAGAGGAAGTATTAGGGAAAAGGGACTCTGGTGGACTAGGTTCCCTCCAAGATTTTGGGGTGAAATACCGAGAAGTTCCGCTTGCTGAGGATGGTGGACTTGATTGGAATGCACTCATGAGTGCTGTCAAACCCAAAACAAGATGCGCACTCATACAGCGGTCTTGTGGTTATTCATGGCGTCGGAGTTTGAGTGTTAATGACATAGGAAGGGTGATAAAAATAATCAAGAAGCAAAATCCCAGCTGCTCAGTCATGGTGGACAATTGCTATGGCGAATTTGTTGAGGGCATTGAGCCTCCCATGGTGGGTGCAGATTTGATCGCAGGCAGTTTGATCAAGAATCCAGGTGGAACGATTGCACCGTGTGGTGGATACGTTGCTGGGAAGCAAAAATGGGTTGAAGCAGCTGCAGCCCGTCTTTCTGCACCGGGACTTGGTGTTGATTGTGGTTCAACCCCTGGCGATGTCATGCGAGCCTTTTTCCAGGGATTGTTTCTTTCACCTCAAATGGTTGGAGAAGCAATCAAGGGCTCTTACCTGATTGCTGAAGTTTTGGCATCTCAAGGGTATAAAGTGCAGCCACTCCCCCGTGTCCTCCGTTCTGATACAGTTCAGGCCGTCCAGCTTGGAAGCCGTGAGCGTCTCCTTGCTTTCTGCGAGGCAGTTCAGAGAAGCTCTCCAGTAGGTTCATATACCAAACCAATTGCAGGCACCACTCCAGGATATGCATCAGAGGTGATCTTTGCTGATGGAACCTTCATTGATGGGAGTACAAGTGAGCTTTCATGTGATGGGCCTCTTAGAGAGCCATTTGCTGTATTTTGCCAGGTATGGTCATTTGTACCTATGATTTTCTCTTACTCTCCCATTTATGGTCTTAATTTGATATTCCAAATGCAGGGTGGCACTCATTGGACTCAATGGGGACTAGTCCTGGGAGAAGTTTTGAAATCTCTATGA 1401 0.4782 MCIVDSAIISAYYPIRPSTRMATFPLNVINTHHTIASSPFVPEVVKAVDALHSEFRAVDNLVACNTTRVLKAFQKARVGSHHFSGCTGYGHDEAGGRGALDQAFAEIFGAESAIFFSGTHAITCALFALLRPGDELLAVAGAPYDTLEEVLGKRDSGGLGSLQDFGVKYREVPLAEDGGLDWNALMSAVKPKTRCALIQRSCGYSWRRSLSVNDIGRVIKIIKKQNPSCSVMVDNCYGEFVEGIEPPMVGADLIAGSLIKNPGGTIAPCGGYVAGKQKWVEAAAARLSAPGLGVDCGSTPGDVMRAFFQGLFLSPQMVGEAIKGSYLIAEVLASQGYKVQPLPRVLRSDTVQAVQLGSRERLLAFCEAVQRSSPVGSYTKPIAGTTPGYASEVIFADGTFIDGSTSELSCDGPLREPFAVFCQVWSFVPMIFSYSPIYGLNLIFQMQGGTHWTQWGLVLGEVLKSL 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1108 466 SUPERFAMILY PLP-dependent transferases 67 413 IPR015424 -
Aed5g1108 466 Gene3D - 92 296 IPR015421 GO:0003824
Aed5g1108 466 PANTHER - 31 424 IPR009651 -
Aed5g1108 466 Gene3D - 297 429 - -
Aed5g1108 466 Pfam Methionine gamma-lyase 46 423 IPR009651 -
Aed5g1108 466 Gene3D - 41 91 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1108 - - gmx:100809166 792.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1108 5 9375371 9379664 Aed5g1108 5 9375371 9379664 ECH