Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1087 ATGAAATCATTCTTAGTCACTAATATGGCATTGACTTGCACCCTCACATGCTTGACAACATTACTTTGCCTATGTGTGTTTTGTGTGAATGCGGACACCAACAAAGAATTTCTAAAAATGGGACAATCATTGGGAATATCAGACACAGTTCTTTCTTATGATGGAAACTTTGAATTGGGATTTTTCTCCAGAGTCAGAGAGAACTCCACCAAGTACTATGCAGGCATATGGTACAAAAGGGTTACAAACGACAAGATTGTGTGGGTTGCCAACAGAGACTCCCCAGTTCAAACATCAGCAGTTCTCACTATTCAACCTGATGGAAACATCATGATCATAGATGGACAACTGACATACCGTGTGAACAAGGCTTCAAACAATTTTGGTACCTATGCCACGCTTTTAAATTCTGGAAACTTGGTACTTGTGAACTCCTCGAATCAAGTGATTTTGTGGCAGAGTTTTAATGATCCTACGGATACCCTTTTACCTGGAAGGAGCATAGAAAATGATGGTTTCTCAGGTTACTCTTTGTTATTGATGTCATGGAAAAGTGCAGATGATCCTGCACCAGGACCATTTTTCATCCGTTCTAGTTCTGGGCCTTATGGCGGGGTCAGTGTAACCATCTACAATGGCACTGATGTGTTTTGGAGTGATGACCATTACAATGATACTATTTACAATGGTTTGGAAGACTCTTTGACTTGGTCAGTTGGTAATGACTCTAGGATTGTACTACAAGTGTCTGGGGAGCTCATCAAGGAGCATTGGTCAGAGGAGGCAAAGAGTTGGATTCCTATTCGATCATCGAAGTGTGGTACCAACAACGCGTGTGGAGTTTTTTCCATTTGTAATCCACTAGCTCCTCACCCTTGTGATTGTCTTTATGGTTTCCAGCCACTGGATGCTGATTCTTGGAGGAATGGGGACTCATCTGCTGGCTGTGGCAGGAAAACAGCATTGTCCTGCAGTAACAGAAGCAGTAGTAATAGTGCTGAATCTGATGATGGATTCTTACAGTTCAATAAAGTTCAATTACCACAAACTTTGAACGGATACAGCAAGCTAAGGATTGATACGGCAAGAGAGTGTGAAAGAACTTGCTCTGGAAATTGTTCTTGTGTTGCTTATGCTTATTATTTGAATGGTAGTATCTGCCAGTTGTGGCTTGATCAGGTGTTGAGTCTCAAGAACATCTCAACGTATGTGGATGCTTCTGATAATACCAATCCAATTTTTTACCTCAGACTTGCTGCCTCAGAAATAGATATTGCTGATATAAACACAACAAATCCAACAAATGATTTTTCCAAGCATGATAACTCGAAGAGGAATCTACTTCTTGTTGTTATAATCATCTCGCTTCTAATGTTTCTTATAATTGGCCTATTCGTTTATTGGACTATAGGGCGAAGGAGAAAAGGGGAAGATTTGCTACATTTTGATGCTTGGGATCTATGGACAAACAATTCAGGAATGGACCTAATGGATCCAGCATTGGATGATAGTGATAGCACTGATAGTAGTAATCATACAGTGCCAAGATATGTGAACATAGGACTTCTCTGTGTTCAAGAAAGTCCAGCAGACAGACCAACCATGTCTGATGTTGTATCAATGATTGGAAATGACACTGTGGCCCTTCCTTTTCCTAAACCACCAGCATTTCTAAATGTGAGAGGTGATCAAAATTCAGCATTGCCTGGTGGCATGCCACTGATGATGCCAGAAATCTTTTCTGTGAATGTTATCACAGATACAGTTGTGGAAGCAAGATGA 1782 0.4068 MKSFLVTNMALTCTLTCLTTLLCLCVFCVNADTNKEFLKMGQSLGISDTVLSYDGNFELGFFSRVRENSTKYYAGIWYKRVTNDKIVWVANRDSPVQTSAVLTIQPDGNIMIIDGQLTYRVNKASNNFGTYATLLNSGNLVLVNSSNQVILWQSFNDPTDTLLPGRSIENDGFSGYSLLLMSWKSADDPAPGPFFIRSSSGPYGGVSVTIYNGTDVFWSDDHYNDTIYNGLEDSLTWSVGNDSRIVLQVSGELIKEHWSEEAKSWIPIRSSKCGTNNACGVFSICNPLAPHPCDCLYGFQPLDADSWRNGDSSAGCGRKTALSCSNRSSSNSAESDDGFLQFNKVQLPQTLNGYSKLRIDTARECERTCSGNCSCVAYAYYLNGSICQLWLDQVLSLKNISTYVDASDNTNPIFYLRLAASEIDIADINTTNPTNDFSKHDNSKRNLLLVVIIISLLMFLIIGLFVYWTIGRRRKGEDLLHFDAWDLWTNNSGMDLMDPALDDSDSTDSSNHTVPRYVNIGLLCVQESPADRPTMSDVVSMIGNDTVALPFPKPPAFLNVRGDQNSALPGGMPLMMPEIFSVNVITDTVVEAR 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1087 593 Gene3D - 30 156 IPR036426 -
Aed5g1087 593 ProSiteProfiles PAN/Apple domain profile. 324 419 IPR003609 -
Aed5g1087 593 Pfam S-locus glycoprotein domain 223 301 IPR000858 GO:0048544
Aed5g1087 593 Pfam D-mannose binding lectin 86 184 IPR001480 -
Aed5g1087 593 ProSiteProfiles Bulb-type lectin domain profile. 35 155 IPR001480 -
Aed5g1087 593 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 189 IPR036426 -
Aed5g1087 593 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 ISOFORM X1 480 564 - -
Aed5g1087 593 SMART blect_4 35 158 IPR001480 -
Aed5g1087 593 SMART ntp_6 334 410 IPR003609 -
Aed5g1087 593 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 ISOFORM X1 32 427 - -
Aed5g1087 593 CDD B_lectin 42 158 IPR001480 -
Aed5g1087 593 Gene3D Transferase(Phosphotransferase) domain 1 461 547 - -
Aed5g1087 593 CDD PAN_AP_plant 336 419 - -
Aed5g1087 593 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 32 427 - -
Aed5g1087 593 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 480 564 - -
Aed5g1087 593 Pfam PAN-like domain 334 396 IPR003609 -
Aed5g1087 593 SUPERFAMILY Hairpin loop containing domain-like 337 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1087 Aed-Chr5 9139669 9153760 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1087 484 558 Receptor kinase-like Gene Family AT4G11480 48.000 2.86e-17 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1087 - - gmx:100811148 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1087 5 9139669 9153760 Aed5g1087 5 9139669 9153760 ECH