Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1053 ATGGCAGCGGCGGCAGCAGCAACAGCAATCTTCAACACACTCCTCTTCCTGTCAGTCTCTCTCCTCTTCCAACTTTCTCTCTCCTCCTCCATCCACGACCTTCTCCGGTCAAAAGGGCTGCCGCCCGGGCTCCTCCCGGAAGAGGTGAAATCCTACACTTTCTCCTCGACCGGGCACCTGGAGGTCCTCCTGGACGCGCCGTGCCTGACGAAATACGAGAACAGAGTCCTCTTCGAGCAGGTGTTCACCGCCAACCTCACCTACGGCAGCCTCATCGGAGTCGAGGGCCTCCAACAGGAGGAGCTTTTCGTCTGGCTTCCCGTCAAGGACATTATCGTAAATGACCCCTCCTCCGGCCTCATCCTCTTCGACATTGGCCTCGCTCATAAACAGCTCTCCCTCTCCCTCTTCGAAGATCCACCTCACTGCAAACCCGGAGGAGGGTTGAGGAATCATGTGAGGAAGGAAAAAGGTTTCGAGGCTCTGAGGTAG 492 0.5711 MAAAAAATAIFNTLLFLSVSLLFQLSLSSSIHDLLRSKGLPPGLLPEEVKSYTFSSTGHLEVLLDAPCLTKYENRVLFEQVFTANLTYGSLIGVEGLQQEELFVWLPVKDIIVNDPSSGLILFDIGLAHKQLSLSLFEDPPHCKPGGGLRNHVRKEKGFEALR 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1053 163 Pfam Protein of unknown function, DUF538 32 138 IPR007493 -
Aed5g1053 163 Gene3D - 21 144 IPR036758 -
Aed5g1053 163 PANTHER T31J12.3 PROTEIN-RELATED 8 162 IPR007493 -
Aed5g1053 163 PANTHER - 8 162 - -
Aed5g1053 163 SUPERFAMILY At5g01610-like 9 145 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1053 Aed-Chr5 8412808 8415590 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1053 - - gmx:100790931 269.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1053 5 8412808 8415590 Aed5g1053 5 8412808 8415590 ECH