Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1046 ATGCGAAAGATGTCATTCACCGATGCGTCCCTCTTGCCGCTGATTCCAGCAGCGGAGAAGCCCGGTGGAGAGTCGTCACTGTCAGGAACGGAGAAGCTATGCATCGATGAGATGCTGCAGAAGTACTGCGGCGAGTTTGGGCGGTGGCAGTTGAGGCACTTCGTTCTGACGAGCCTGGCATGGGCGTTGGAGGCGTTCCATACAATGGTCATCATATTTGCAGACCGCAAGCCGGAGTGGCAGTGCCTGGACGGCATGGCTGGGCTGTGGTGCGACCCGGCTGCAACCAGCGTGTGCCACCTCAAGCCAGGGTCGTGGGAGTGGCTCGGGGACTCAACTGTGACGGAGTGGGGCCTGGTTTGCGGTGACAAGTATAAGGTTGGACTTGCTCAAGCCATCTTCTTCGGAGGCTGCATGATCGGTTAG 426 0.5869 MRKMSFTDASLLPLIPAAEKPGGESSLSGTEKLCIDEMLQKYCGEFGRWQLRHFVLTSLAWALEAFHTMVIIFADRKPEWQCLDGMAGLWCDPAATSVCHLKPGSWEWLGDSTVTEWGLVCGDKYKVGLAQAIFFGGCMIG 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1046 141 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 35 141 - -
Aed5g1046 141 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 4 35 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1046 Aed-Chr5 8355530 8355955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1046 16 141 Organic Solute Cotransporters AT3G20660 63.566 1.26e-51 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1046 K08202 - gmx:100805613 233.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0693 1 8171270 8175024 Aed5g1046 5 8355530 8355955 PCT