Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1045 ATGACTTCGTCTCTCTCGGGTTCAACAGATGTATTTTACAAATTCAAAGACCAAACTGGAAACTTCAAAGAAAGGTTGGCCAATGATATAAAAGGAGTATTGAGCTTATATGAAGCAGCCCAATTAAGATGTCATGGAGAGGAGATACTTGAAGAAGCACATAATTTCACTCTCAATCTGTTAACTAAATCATTAACCACCCAATTAAGCCCTTCTCTTGTGGCATTAGTGCACCACAGCTTAAGACACTCACTTCGCAGGGGATTGCCTAGGCTGTCAGCAACATATTACATGTCTTTCTACCAAGAAGAACCTTCCCATGATGAAAAATTGTTGACATTTGCAAAACTAGATTTTAACATGTTACAGGAGCTACATAAAAAAGAAGCCAGCAGTGTAACCAAGTGGTGGATTAAGGATTTAAATGTCCCAACAAATCTACCTTTTGTACGAGATAGGATCGTAGAAAGAAGGATAACAACAAAAGTAATTGCTCTATGTTCCATCATTGATGACCTCTATGATGCTTATGGAACCATTGATGAACTTGAGCTTTTCACCAATGCAATTGAGAGGTGGGATACTAGCTGCTTGGTTGATCTCCCAGAATACATGAAAGTATGTTATATGGCTGTTTTGGATGTTTTTAAAGAAATGGAGCAAGAGATGAGAAAGCAAGATAAAGTATATTGCATCAAGTATACTAAGAAAGAAATGAAAAGATTCGTCGAAGCTCAGATGACTGAGGCAAAATGGTGTGATTGCATGCACATGCCAACAATAGAGGAGTACATGCAAGTTAGAAGAGTATCAAGTGGTTATCATTTGTTGACTATTATATCTTTCGTTGGCATGGAAGATACAATCGAAGAGGTCCTTATATGGGTAGCAAGTGACCCAATAATTGTTGTAGCTTCTACAATTATATGTAGGCTCGTTGATGACATTGTTGGAGATGAGTTTGAGCAGGAAAGAAAACATGTTGCTTCAAGCATTCAATGCTATATGAAGCAACATAAAACCTCAAGGGAAGATACCATTAAAGAACTACGCAAGATGGTTGAGAGTGCTTGGAAGGGCATAAATGAGGCATGCCTTATTCATACTCAAGTACCATTGACTTTTCTTATGCGTGTGATCAACTTTGCACGTGTGATAGAAGTTCTTTACAAAGATGAAGATAACTATACAAATGCTGGAGGGATACTCAAAGAATACATCAAAGCTGTACTAGTTAATAAGATGCCTGTCTATGTAAGCTCGAAACTTGGTTCTTTTTATAATTACATATTTTTTATTTACGAATAA 1308 0.3693 MTSSLSGSTDVFYKFKDQTGNFKERLANDIKGVLSLYEAAQLRCHGEEILEEAHNFTLNLLTKSLTTQLSPSLVALVHHSLRHSLRRGLPRLSATYYMSFYQEEPSHDEKLLTFAKLDFNMLQELHKKEASSVTKWWIKDLNVPTNLPFVRDRIVERRITTKVIALCSIIDDLYDAYGTIDELELFTNAIERWDTSCLVDLPEYMKVCYMAVLDVFKEMEQEMRKQDKVYCIKYTKKEMKRFVEAQMTEAKWCDCMHMPTIEEYMQVRRVSSGYHLLTIISFVGMEDTIEEVLIWVASDPIIVVASTIICRLVDDIVGDEFEQERKHVASSIQCYMKQHKTSREDTIKELRKMVESAWKGINEACLIHTQVPLTFLMRVINFARVIEVLYKDEDNYTNAGGILKEYIKAVLVNKMPVYVSSKLGSFYNYIFFIYE 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1045 435 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 8 107 IPR008930 -
Aed5g1045 435 Pfam Terpene synthase family, metal binding domain 156 359 IPR005630 GO:0000287|GO:0010333|GO:0016829
Aed5g1045 435 PANTHER OS04G0344100 PROTEIN-RELATED 10 399 - -
Aed5g1045 435 Gene3D Farnesyl Diphosphate Synthase 122 425 IPR008949 -
Aed5g1045 435 Pfam Terpene synthase, N-terminal domain 8 81 IPR001906 GO:0010333|GO:0016829
Aed5g1045 435 Gene3D - 3 121 IPR036965 GO:0010333|GO:0016829
Aed5g1045 435 SFLD Isoprenoid Synthase Type I 108 415 - -
Aed5g1045 435 SFLD Terpene Cyclase Like 1 C Terminal Domain 108 415 IPR034741 -
Aed5g1045 435 PANTHER TERPENE SYNTHASE 2-RELATED 10 399 - -
Aed5g1045 435 SUPERFAMILY Terpenoid synthases 107 413 IPR008949 -
Aed5g1045 435 CDD Terpene_cyclase_plant_C1 8 413 IPR044814 GO:0010333|GO:0016102
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1045 Aed-Chr5 8349581 8352873 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1045 K15803 - gmx:100798701 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1045 5 8349581 8352873 Aed5g1045 5 8349581 8352873 ECH