Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1044 ATGTCTGATGTAACCTCATCATCACTTCCAATTTTGGCCCAGGAGGCAAAACCTCCCTCAAACTTCACTCGACCCACTGCAAATTTTCATCCTTCCATTTGGGGGGATTATTTTCTTTCCTATGTTCCTAGTTCCTTGGAAAGTGATAGTCATATCCAACAAGTTCAACCATTAAAAGAAGATGTGAGGAAGATGCTTGTCTCTCCTATTGATAACAATTTCTCTTTCAAATTAAACTTTATTGATTCAGTCCAACGTTTGGGTGTTTCCTATCATTTTGAACATGAAATTGATGGAGCATTACACCATATTTATGACATTTCAACAAAGGACAATAGTATCATAGCTCTTGATAGTGATGGTCTTTATCATGTGGCTCTCCTCTTTCGGTTGCTTAGGCAACATGGATATCGCATTTCATCAAATGTATTTTCCAAATTCAAGGACCAAACTGGAAACTTTAGCGAAATGGTAGTAAATGATATTCAAGGAATGTTAGGGTTGTATGAAGCAGCTGAACTAAGATTTTATGAAGAGATACTTGAAGAAGCGCATGATTTCACTCTTATTCAGCTAACTAAGTCTCTAACTACCCAACTAAGTCCCTCTATGGCTGCACAAGTGAAACATAGCTTAAATAGGTCACTTCGCAAGGGATTGCCTAGGCTGGAGGCAACACATTACATGTCTTTCTACCAACAAGATCCTTCCCATGCTCAAAATTTGCTCAAATTTGCAAAAATGGATTTTAATATGTTGCAGGAGCTGCATCAGAAAGAAGTTAGAAATGTGACCAAGTGGTGGATTAAGGATTTAAATGTCTCAGCCAAATTGCCATTTGTACGAGATAGGATTGTAGAATGTTACTTTTGGATTTTGGGAATATACTTTGAGCCACAGTATTCTCTTGCTAGAAGTATAACAACAAAAGTAATTTCTCTATGTTCTGTCATTGATGACATGTATGATGCCTATGGAACCATTGACGAACTTGAGCTTTTCACCAATGCAATTGAGAGGTGGGATGCTTGTTGCTTGGTTGATCTCCCAGAATACATGAAAGTGTGTTATATGGCAATTTTGAATGTTTTTGAAGAAATAGAGGAAGAGATGAAAAACCAAGGAAAAGTATATTGCATCAAGTATGCTAAGAAAGAGATGAAGAGACTAGTCAAGGGTCACATGGCTGAGGCAAGATGGCTTCATTGCAATCATACACCAACAATAGAGGAGTACATGCAAGTTAGAATTCCATCAGGTGGTTACCCTTTGCTGGTTACCATATGCTTTGTTGGCATGACAGATACAACAGAGGAGGTTCTTATATGGGCAACGACTGACCCAAAAATTGTTGTAGCTGCTTCAGTTATTAGTAGGCTTATGGATGACATTGTTGGAGATGAGTTTGAGCAGGAAAGAGAGCACGTTGCATCAAGCATTGAATGCTATATGAAGCAACATAATATTTCAAGACAAGATGCCATTAAAGAACTACATAAGATGGTTAAGAGTGCTTGGAAAGACATCAATGAGGCATGCCTTAACCCTACTCAAGTACCAATGAATTTTCTCTTGCGTATTGTCAACCTTGTGCGCATGCTGGACGTGATTTACAAAGATGAAGATAATTATACAAATGCTGGAGGGTTAATGAAAGATTACATCAAAGCTTTATTAGTTAATAAGATGCCTGCATGTACAAGCTAG 1707 0.379 MSDVTSSSLPILAQEAKPPSNFTRPTANFHPSIWGDYFLSYVPSSLESDSHIQQVQPLKEDVRKMLVSPIDNNFSFKLNFIDSVQRLGVSYHFEHEIDGALHHIYDISTKDNSIIALDSDGLYHVALLFRLLRQHGYRISSNVFSKFKDQTGNFSEMVVNDIQGMLGLYEAAELRFYEEILEEAHDFTLIQLTKSLTTQLSPSMAAQVKHSLNRSLRKGLPRLEATHYMSFYQQDPSHAQNLLKFAKMDFNMLQELHQKEVRNVTKWWIKDLNVSAKLPFVRDRIVECYFWILGIYFEPQYSLARSITTKVISLCSVIDDMYDAYGTIDELELFTNAIERWDACCLVDLPEYMKVCYMAILNVFEEIEEEMKNQGKVYCIKYAKKEMKRLVKGHMAEARWLHCNHTPTIEEYMQVRIPSGGYPLLVTICFVGMTDTTEEVLIWATTDPKIVVAASVISRLMDDIVGDEFEQEREHVASSIECYMKQHNISRQDAIKELHKMVKSAWKDINEACLNPTQVPMNFLLRIVNLVRMLDVIYKDEDNYTNAGGLMKDYIKALLVNKMPACTS 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1044 568 Pfam Terpene synthase family, metal binding domain 243 508 IPR005630 GO:0000287|GO:0010333|GO:0016829
Aed5g1044 568 Gene3D Farnesyl Diphosphate Synthase 31 553 IPR008949 -
Aed5g1044 568 SFLD Terpene Cyclase Like 1 C Terminal Domain 240 563 IPR034741 -
Aed5g1044 568 Gene3D - 72 238 IPR036965 GO:0010333|GO:0016829
Aed5g1044 568 PANTHER OS04G0344100 PROTEIN-RELATED 17 545 - -
Aed5g1044 568 SUPERFAMILY Terpenoid synthases 240 564 IPR008949 -
Aed5g1044 568 CDD Terpene_cyclase_plant_C1 24 561 IPR044814 GO:0010333|GO:0016102
Aed5g1044 568 Pfam Terpene synthase, N-terminal domain 33 212 IPR001906 GO:0010333|GO:0016829
Aed5g1044 568 SFLD Isoprenoid Synthase Type I 240 563 - -
Aed5g1044 568 PANTHER TERPENE SYNTHASE 2-RELATED 17 545 - -
Aed5g1044 568 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 30 238 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1044 Aed-Chr5 8332928 8337361 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1044 K15803 - gmx:100802427 937.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1044 5 8332928 8337361 Aed5g1044 5 8332928 8337361 ECH