Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1042 ATGTCTGCTGCAAATTTAAACCTCAGTTACTTCACTCCAGATGTCAAATCTGGTCAACATCGACATGTTGCAGATTTTCACCCAAGCATTTGGAAGGATTGTTTCCTTCAATATGCTTCAGAATCCACGGAACTCGATCAGGACATTGGGACACAAATTGAAACACTAAAAAAAGAAGTGAGCAAGATGCTTGTGATCTCAAAGACTGAGAAGCCATCAGCAAAAATTAACTTGATTGATTCAATCTATCGTTTGGGGGTGAACTATCACTTTGAACTTGAGATTGAAGAAATCTTGCAACATATTCACAACAATTATGTTGCAAATGGAGAAATAATTCTTGAAGACAACCTTTGCTCTCTTGCTGTGCTATTTAGAGTGCTGAGGCAACACGGATTTCATGTTTCACCTCTTGTGTTCGACAAGTTCAAGGATGTTCAAGGAAACTTCAGTGAAAGACTTATTAGTGATGTTGAGGGAATGTTATGCTTGTATGAAGCCTCACATGTGAGGGTTCATGGAGAGGACATTTTAGAAGAAGCATTGGCTTTCACTTCAACTCACCTTGGATCCATTGCCACCCAATTGAGCCCTAATCTTGCAGCTCAAGTCAATCATAGCTTGAGGCAAGCCCTGCACAAGAACTTGCCCAGGCTAGAGGCACTGCGTTACATTTCTATCTACGAGCAAGATCCTTCTCATAATGAAATTCTACTCACTTTTGCAAAATTGGATTTCAACAAATTGCAAAATCTACACCAAAAAGAATTTGGCTACATTTGCAAGTGGGATAATAGATGCTTGAATGGTCTCCCAGAATGCATGAAACTATCTTATAAGTTACTCATGAAGGTTTATGAAGAAATAGAACAGGAAATGAAGAATGAAGGCAGAGCATATTGCGTTAACTACGGCAAAAAAGAATTCAAAAAGGTGGTCCAAGCCTACATGACTGAGGCCAGATGGTTCAACAACAATTATATTCCAACAACAGAGGAGTACATGCACATATCAACAATATCATGTGGTTACTCAATGCTTACAACAACAAGTTACATTGGCATGGGAGACACAGCCACAGAGAGCATCTTTAAATGGGCAACAAATGAACCAAAAATAATTAAGGCTTCTTCTATTCTTTGCAGGCTAATGGATGACATTGTGTCCAACGAGTTTGAACAGAAAAGAGGACACGTTTGCTCCTTCTTGGAATGCTATATGAGAGAATATGGTGAGTCTAGGGAAGTTGCCATTAAGGAATGCCAAAAGAGAATAGTAAATGCTTGGAAGGATATAAATGAGGAGTTTCTTAGGCCAACCAGTGTTCCAATGCCTTTTCTGACACGCGTTCTCAATCTCTCACGTTTCATGGATGTGATATATAAAGATGAAGATAACTACACTCATGCTGAAGGAGTAATGAAGACTTATATTAAAGTTTTGCTCATAGATCCGGTGCCAATATGA 1467 0.3899 MSAANLNLSYFTPDVKSGQHRHVADFHPSIWKDCFLQYASESTELDQDIGTQIETLKKEVSKMLVISKTEKPSAKINLIDSIYRLGVNYHFELEIEEILQHIHNNYVANGEIILEDNLCSLAVLFRVLRQHGFHVSPLVFDKFKDVQGNFSERLISDVEGMLCLYEASHVRVHGEDILEEALAFTSTHLGSIATQLSPNLAAQVNHSLRQALHKNLPRLEALRYISIYEQDPSHNEILLTFAKLDFNKLQNLHQKEFGYICKWDNRCLNGLPECMKLSYKLLMKVYEEIEQEMKNEGRAYCVNYGKKEFKKVVQAYMTEARWFNNNYIPTTEEYMHISTISCGYSMLTTTSYIGMGDTATESIFKWATNEPKIIKASSILCRLMDDIVSNEFEQKRGHVCSFLECYMREYGESREVAIKECQKRIVNAWKDINEEFLRPTSVPMPFLTRVLNLSRFMDVIYKDEDNYTHAEGVMKTYIKVLLIDPVPI 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1042 488 Pfam Terpene synthase family, metal binding domain 260 431 IPR005630 GO:0000287|GO:0010333|GO:0016829
Aed5g1042 488 PANTHER OS04G0344100 PROTEIN-RELATED 260 468 - -
Aed5g1042 488 CDD Terpene_cyclase_plant_C1 21 485 IPR044814 GO:0010333|GO:0016102
Aed5g1042 488 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 27 234 IPR008930 -
Aed5g1042 488 Gene3D - 70 234 IPR036965 GO:0010333|GO:0016829
Aed5g1042 488 Gene3D Farnesyl Diphosphate Synthase 262 486 IPR008949 -
Aed5g1042 488 SUPERFAMILY Terpenoid synthases 234 486 IPR008949 -
Aed5g1042 488 Pfam Terpene synthase, N-terminal domain 30 208 IPR001906 GO:0010333|GO:0016829
Aed5g1042 488 Gene3D Farnesyl Diphosphate Synthase 28 261 IPR008949 -
Aed5g1042 488 PANTHER TERPENE SYNTHASE 2-RELATED 16 263 - -
Aed5g1042 488 PANTHER TERPENE SYNTHASE 2-RELATED 260 468 - -
Aed5g1042 488 PANTHER OS04G0344100 PROTEIN-RELATED 16 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1042 Aed-Chr5 8299156 8303529 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1042 - K15803 aprc:113865171 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1042 5 8299156 8303529 Aed5g1042 5 8299156 8303529 ECH