Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1028 ATCACCGAGTTTGAGGCATGTCACTGTGCTTCCGGGGAAAGGGTTGAAGGAGTTTATCAAAGTGAAGGTTGCCTGGGAAAAAAATTAAGGCCGAAGATTTTGGGAAGAAGTATTGAATCAAATGTCCCAGAAGTGATATACGGAATATTAGATCAACCCCTTGTCAAAAATGAATTAGAGGGAAGGTTTGATATTCCTCAGACACTAGAAGAGTTCATGATCCAAATGAAAGAAGGTGGATATGATGCCAAGACATTCGCAATTAAACTAAGAGAAATGGTAACCCTTATGGAACAAAGAACCAGGGAAGCCATAGTCCAAGAATATCTATATCGTCATGTAGCCTCAAGTGGCATACCGAAACAGCTTCATTGCCTTGCCTTAAGGCTTGCCAGTGAGCACACCAACAATGCAGCCGCGCGCCTTCAGCTACCCTCTGCAGAGCTTGTCCCTGCTCTGGTTGACAACAACTACTTTCACTTTGTTCTGGCCTCAGACAACGTGCTTGCGGCCTCTGTGGTTGCAGCATCGCTTGTTCACAACAGTTTACGGCCTCATAAGGTTGTTCTGCACATAATTACAGATAGAAAGACTTACTATCCAATGCAGGCTTGGTTCTCCTTGCACCCTTTGTCACCTGCCATAATTGAGGTCAAGGCATTGCATCACTTTGATTGGTTTACAAAGGGGAAGGTTCCTGTGCTGGAAGCAATGGAAAAGGATCAAAATGTGCGATCACAGTATAGAGGAGGTTCATCAGCAATAGTTGCAAATACTACTGAGAAGCCAAAAGTTATTGCAGCAAAGCTGCAAGCACTTAGTCCTAAGTATAATTCAGTAATGAATCACATTCGGATACATCTTCCAGAGGTGGTCTTTCTTGATGATGACATTGTGGTACAAACTGATCTTTCACTTCTGTGGGACATTGACATGAATGGAAAAGTCAATGGAGCAGTAAAAACATGTAGTGGAGAAGATAAGTTTGTGATGTCAAAGAGGTTGAAAAGCTATTTGAACTTCTCACACCCTTTAATATCCCAAAATTTTGATCCCAATGAATGTGCTTGGGCCTATGGTATGAACATTTTCGACCTTGATGCTTGGAGGAAGACCAATATAAGCTCTACATACCACTATTGGGTTGAGCAGAATATAAAATCAGACCTGAGTTTGTGGCAGCTAGGAACATTACCTCCAGGATTAATAGCATTCCATGGTCATGTCCACACAATTGATCCTTTTTGGCACATGTTGGGATTGGGATATCAGGAAAATACAAGTTTTGTTGATGCTGAGACTGCTGGTGTGATACATTTCAATGGCAGGGCAAAGCCATGGCTAGATATAGCTTTTCCCCATCTAAGGCCATTGTGGACTAAGTACATTGACTTTTCAGATTACTTCATAAAGAGCTGTCACATTAGGGCATTGTAA 1437 0.4203 ITEFEACHCASGERVEGVYQSEGCLGKKLRPKILGRSIESNVPEVIYGILDQPLVKNELEGRFDIPQTLEEFMIQMKEGGYDAKTFAIKLREMVTLMEQRTREAIVQEYLYRHVASSGIPKQLHCLALRLASEHTNNAAARLQLPSAELVPALVDNNYFHFVLASDNVLAASVVAASLVHNSLRPHKVVLHIITDRKTYYPMQAWFSLHPLSPAIIEVKALHHFDWFTKGKVPVLEAMEKDQNVRSQYRGGSSAIVANTTEKPKVIAAKLQALSPKYNSVMNHIRIHLPEVVFLDDDIVVQTDLSLLWDIDMNGKVNGAVKTCSGEDKFVMSKRLKSYLNFSHPLISQNFDPNECAWAYGMNIFDLDAWRKTNISSTYHYWVEQNIKSDLSLWQLGTLPPGLIAFHGHVHTIDPFWHMLGLGYQENTSFVDAETAGVIHFNGRAKPWLDIAFPHLRPLWTKYIDFSDYFIKSCHIRAL 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1028 478 CDD GT8_like_1 159 464 - -
Aed5g1028 478 PANTHER GALACTURONOSYLTRANSFERASE 12-RELATED 21 476 - -
Aed5g1028 478 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 161 469 IPR029044 -
Aed5g1028 478 Pfam Glycosyl transferase family 8 155 451 IPR002495 GO:0016757
Aed5g1028 478 SUPERFAMILY Nucleotide-diphospho-sugar transferases 160 475 IPR029044 -
Aed5g1028 478 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 21 476 IPR029993 GO:0047262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1028 Aed-Chr5 8120410 8123219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1028 21 477 Glycosyltransferase AT5G54690 78.925 0.0 787
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1028 K20867 - gmx:100777811 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1028 5 8120410 8123219 Aed5g1028 5 8120410 8123219 ECH