Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1016 ATGGCTTCTTCCACCATCACCTCCTCCATCCTCTCATCAACTCTATTCAACAAATCATCATCATCATCGCCATTGTCATCACCCTCCTTTCATGTCTCCCCCACTCTCCGCCCCCAGCAACACGCGCCACGCGCCTCCATGTCAGCCTCTGCGCCACCGCCGCCGTCCTACGACCTCGGCTCCTTCCGGTTCGATCCGATCAAGGAGTCGATCGTGTCGCGCGAGATGACCCGCCGTTACATGACTGACATGGTCACCCATGCCGACACCGACGTCGTCATCGTCGGCGCAGGCTCCGCCGGCCTCTCCTGCGCCTACGAGCTCAGCAAAAACCCCTCCGTCAAAGTCGCCATCGTGGAGCAGTCCGTCAGCCCCGGCGGCGGCGCATGGCTCGGCGGCCAACTCTTCTCCGCCATGGTAGTGCGAAAGCCAGCACACATCTTTCTAGACGAGCTCGGTGTTGAGTACGACGAGCAAGACAACTACGTGGTGATCAAGCACGCAGCGCTGTTCACATCCACCATCATGAGCAAGCTCTTGGCGAGGCCAAACGTGAAGCTCTTCAACGCTGTGGCGGCGGAGGATTTGATCGTGAAGGAGGGGAGAGTTGGCGGGGTTGTCACCAACTGGGCCTTGGTTTCAATGAACCACGACACACAGTCCTGCATGGACCCCAACGTCATGGAGGCTAAGGTGGTCGTCAGTTCCTGTGGCCATGATGGACCCTTTGGAGCCACTGGGGTTAAGAGGCTCAAGAGCATTGGCTTGATTGACACTGTGCCTGGGATGAAGGCCCTTGACATGAACAAAGCTGAGGATGCCATTGTCAGGCTCACTAGAGAGGTTGTGCCCGGCATGATTGTTACTGGCATGGAAGTTGCTGAGATTGACGGTGCTCCCAGGATGGGTCCAACATTTGGAGCAATGATGATTTCAGGGCAGAAAGCAGCTCATCTGGCTTTGAGAGCGTTGGGACTTCCCAATGCTTTGGATTCCGTAGGAAACGTCGTCGTCCAGCCTGAGCTTGTGCTAGCTGCTGCTGAATCTGCTGAAATTGCAGATGCTTAA 1068 0.5665 MASSTITSSILSSTLFNKSSSSSPLSSPSFHVSPTLRPQQHAPRASMSASAPPPPSYDLGSFRFDPIKESIVSREMTRRYMTDMVTHADTDVVIVGAGSAGLSCAYELSKNPSVKVAIVEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGVEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKEGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGLIDTVPGMKALDMNKAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALRALGLPNALDSVGNVVVQPELVLAAAESAEIADA 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1016 355 Gene3D - 58 88 - -
Aed5g1016 355 SUPERFAMILY FAD/NAD(P)-binding domain 52 317 IPR036188 -
Aed5g1016 355 PANTHER THIAMINE THIAZOLE SYNTHASE 1 355 - -
Aed5g1016 355 PANTHER THIAMINE THIAZOLE SYNTHASE, CHLOROPLASTIC 1 355 - -
Aed5g1016 355 Pfam Thi4 family 73 306 - -
Aed5g1016 355 MobiDBLite consensus disorder prediction 16 62 - -
Aed5g1016 355 MobiDBLite consensus disorder prediction 16 46 - -
Aed5g1016 355 Gene3D - 89 324 IPR036188 -
Aed5g1016 355 TIGRFAM TIGR00292: thiazole biosynthesis enzyme 69 323 IPR002922 -
Aed5g1016 355 Hamap Thiamine thiazole synthase, chloroplastic [THI4]. 3 333 IPR027495 GO:0009228
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1016 Aed-Chr5 8038689 8041164 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1016 K03146 - gmx:547462 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1016 5 8038689 8041164 Aed5g1016 5 8038689 8041164 ECH