Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1012 ATGTTTTCTGCTACTAAGCTCAAATCGGTTGATTTTTACAGGAAAATCCCGAGAGATTTGACCGAGGCGTCGTTGTCAGGAGCGGGTTTATCGATAGTGGCAGCTCTCGCCATGATGTTTTTATTTGGAATGGAACTAAGTAATTATTTGTCTGTTAGCACCTCCACATCTGTGATTGTTGACAAGAGTTCTGATGGTGACTATTTACGCATTGATTTCAATATCAGTTTTCCTGCACTCTCATGTGAGTTTGCATCAGTTGATGTGAGTGATGTGCTGGGAACAAACAGGCTCAATATAACAAAAACAGTTCGTAAGTTTTCTATTGATTCAAATTTAAGACCCACTGGCGCTGAGTTTCATTCAGGTACTGTTTCAAATGCTGTAAAGCATGATGATGAAGTAGATGAAGAATCTGTTGAAGGTTCTTTTACACTCACAACAAATAATTTTGATAAATATGTTCATCAGTTTCCAGTTACAGTTGTAAATTTTTATGCACCTTGGTGTTCCTGGTGTCAACGTTTGAAACCTTCATGGGAGAAGACGGCTAAACTTATGAAAGAAAGATATGACCCAGAAATGGATGGGCGTATAATTTTGGGAAAGTTTATGGAGGATTTAGTCACATCTCTTCCAACAGAATCTCAAAAGCTAGCTCTGGAGGATAAATCTAATGGTACAAAGAATGCAAAAAGGCCAGCACCATCAACAGGTGGTTGTAGAGTAGAGGGATATGTGCGTGTGAAAAAGGTTCCAGGAAATTTGATCATCTCAGCTAGATCAGATGCCCATTCCTTTGATGCTTCTCAAATGAACATGTCACATGTCATAGACTACTTGTCTTTTGGAAAGAAAGTGACAACTAGGGCCATGAATGATATGAAGCTCTTGATACCATACATAGGTAGCAGCCATGACAGGCTCAATGGCCGGTCATTCAGCAATACTCGGGATTTAGGCGCAAATGTTACTATAGTTAAGACTGAGGTAGTGGCTAGAAAAGGTTATAAATTAATTGAGGAGTACGAGTACACAGCGCACAGCAATGTGGCACACAGCGTAGACATTCCTGTTGCAAAGTTTCATCTTGAGCTCTCCCCTATGCAGGTCTTAATAACAGAAAACCAGAAGTCTTTTTCACATTTTATTACAAATGTCTGTGCCATTATTGGGGGTGTTTTCACGGTAGCTGGAATTTTGGACTCGATTCTGCACAACACTGTTAGAATGATGAAAAAAATTGAGCTTGGCAAGAATTTTTGA 1266 0.3949 MFSATKLKSVDFYRKIPRDLTEASLSGAGLSIVAALAMMFLFGMELSNYLSVSTSTSVIVDKSSDGDYLRIDFNISFPALSCEFASVDVSDVLGTNRLNITKTVRKFSIDSNLRPTGAEFHSGTVSNAVKHDDEVDEESVEGSFTLTTNNFDKYVHQFPVTVVNFYAPWCSWCQRLKPSWEKTAKLMKERYDPEMDGRIILGKFMEDLVTSLPTESQKLALEDKSNGTKNAKRPAPSTGGCRVEGYVRVKKVPGNLIISARSDAHSFDASQMNMSHVIDYLSFGKKVTTRAMNDMKLLIPYIGSSHDRLNGRSFSNTRDLGANVTIVKTEVVARKGYKLIEEYEYTAHSNVAHSVDIPVAKFHLELSPMQVLITENQKSFSHFITNVCAIIGGVFTVAGILDSILHNTVRMMKKIELGKNF 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1012 421 PANTHER PROTEIN DISULFIDE-ISOMERASE 5-3 219 421 - -
Aed5g1012 421 Pfam Thioredoxin 145 189 IPR013766 -
Aed5g1012 421 PANTHER PROTEIN DISULFIDE-ISOMERASE 5-3 1 204 - -
Aed5g1012 421 Pfam Endoplasmic reticulum vesicle transporter 235 402 IPR012936 -
Aed5g1012 421 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 219 421 IPR045888 -
Aed5g1012 421 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 7 97 IPR039542 -
Aed5g1012 421 SUPERFAMILY Thioredoxin-like 144 203 IPR036249 -
Aed5g1012 421 Gene3D Glutaredoxin 126 224 - -
Aed5g1012 421 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 1 204 IPR045888 -
Aed5g1012 421 CDD PDI_a_family 145 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1012 Aed-Chr5 7990336 7999404 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1012 - - gmx:100787595 753.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1012 5 7990336 7999404 Aed5g1012 5 7990336 7999404 ECH