Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1004 ATGCTGGAGGGCAAGGCTGTGGTTGGTGAAACTGACATGCTTCAGACCATGCAGCAAGATGCCATGGGTTTGGCATCCAAAGCACTCGATTTCTTTGATGTCACTGAAGCCATTGAGATTGCTCGGTTTATAAAGAAGGAATTTGATAGAATGCATGGAGCTGGATGGCAGTGCATAGTAGGCACTGATTTTGGTTCGTTTGTGACACACTGTTGTGGCTGTTTCATCTATTTCTGCTTAGGAAACTTAGCAATTTTGCTATTCAGGGGCTCGGCTGCTCCAGAGGCACATGAAAATCGGTTCTCAGCACTAGAGGCTGCCAAAGCATAA 330 0.4606 MLEGKAVVGETDMLQTMQQDAMGLASKALDFFDVTEAIEIARFIKKEFDRMHGAGWQCIVGTDFGSFVTHCCGCFIYFCLGNLAILLFRGSAAPEAHENRFSALEAAKA 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1004 109 PANTHER DYNEIN LIGHT CHAIN 1 97 IPR001372 GO:0007017|GO:0030286
Aed5g1004 109 SUPERFAMILY DLC 1 90 IPR037177 GO:0007017|GO:0030286
Aed5g1004 109 PANTHER DYNEIN LIGHT CHAIN 1 97 - -
Aed5g1004 109 Pfam Dynein light chain type 1 5 89 IPR001372 GO:0007017|GO:0030286
Aed5g1004 109 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 1 90 IPR037177 GO:0007017|GO:0030286
Aed5g1004 109 SMART Dynein_light_2 1 90 IPR001372 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1004 Aed-Chr5 7919920 7920953 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1004 K10418 - gmx:100779040 216.468