Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1003 ATGGCTCTTTCCTCCAAACATCCACACCTGTTCAACCATATTAGGACTTTTGTGAATGTGAAGGTTAAATGGGTCCAAGACCCATATCTTGATTATGCTGTCCTGAAAGAGAAAGATCTCAAACAGACAATTTCCCTCAAGAACCAAATCATTTCATCTCCTTCCAATTCCCTCTCCATCTATACTGCTTCTCAACTGAAAGCGTCCCTCAACCTTCCCACTACAACTTCCAAATTTATTGACAAATATCATTGTGTTTTCACACAATTCCAACCTGGTCCTGGTCTTCCTCCAGCTGTCAAGCTCACTCCTCAAGCTTTTTCTATCCACAAAGAAGAAATGGCTATTCATAACTCTCCCACTAATCGTGAAGACTCTGTTCAGAGGCTTGCAAGGTTTCTAATGCTTGCTGGCATGACAAAATTGCCTCTTTATGTAATTGAGAAGCTAAAATGGGACATGGGACTTCCTCATGATTATGTGACGACCCTTTTGGCTGATTACCCTGATTATTTTGATATTTGTGTTGTGGAAGATCCATCGTCTGGAAAAGAATTGCTTGCTTTAGAGCTTGTTTTGTGGAGAAAAGAGCTTTCTGTGTCTGAGTTAGAAAAGAGGGCAATGAGCTTGGGATATAGTGGAGATAAAAGAAGGCATGATATCGCATTTCCCATATTTTTGCCAAAAGGTTTTGATCTAGAGAAGAGGGTGAAGACTTGGGTTGAGAATTGGCAAAAGTTGCCTTACATTTCTCCATATGAAGATGCTTTTCATCTTGACTCAAATAGTGACCAAGCAGAGAAGTGGGCAGTGGCAATTTTGCATGAGTTGCTTTCTCTTCTTGTGTCAAAGAAGACAGAGAGAGACAATTTGCTATGTTTTGGAGAGTGTTTGGGGTTGGCCTTGAGATTTAAGAAGGCTTTGGTGCATCATCCTGGTATATTTTACATTTCCAATAAGATTAGGACTCAGACTGTTGTACTTAGAGAGGCTTATAGAAATGATTTTCTGGTTAAGAAACATCCATTGAAGCACCATGAACAAGCTGATTTGGTGGATGATCATGAAGTTAACAAGCTGATCAGTGATTTGGTAGATGATTATGTAGTTTCCATTCAAACTATCTCACTCATCAATCAACCACAGTGGTGGTTGATTGTGGATCAAATTGTGGCTGTGGGGATACAGCATGAAAATATTCAGTGGATGGCGTCGTTTTCTTTTGGTCTTCCTTTGATTTTCCTCCTTACTCATCTGTTTTCTGTCAGGGAATTGAACATAAACTCAAAAATGGAGGAACCCCGCAAGCAACTAAACAAGAAATTTGATCATCTGATTCTTGGTCCTGCTGCTGGACAAGGCTTGTCAAATCGTTTGCAATGCCAAGGGACAAAAGCACTTAATAGGATCCATTCTTCTAACAGCAGATCAGGTGTAGATGGAAGTATCACATTTGTCACTGTCTTTACCATTTATAATTCTTCTCCCAATGATGTAGATGATAAATCATCAAATACAGTTGTTGGCAATGCTTCATATGATAAGTTTGGCAGGTCAATGGCTTTGTTGAATGTCTTCATTAACTTCATTCAGGTCGCATTGCCCCAGAACAAAGTGATTATTCTGACAGATCCAGTGTCTGACCTTTCAGTGCAACAAAATGGGGTATCTCTGTATCCTATAGAAGGTGAATATTCACGAGACAAGTTGATGCTCCAAAGGATCAGGTCTTACATTACCTTTTTAGAAACAAGGCTCCAGAATCTTTCTCAGAAGCTGAAGAATATCACTCATTACATCTTCACTGATTCTGATATAGCAGTTGTTGATGATTTAGGGCATATTTTTCGTGACCATCCTAATTTTCATGTGGCTCTGACCTTTAGGAACAATAAGGCTCAACCTTTGAATTCAGGATTCATTGCCGTAAGGGGTACCCATGAAGCAATTTTAAGTGCAAAGCTTTTCCTACAAGAGGTCTTGAAAGTTTACAGCACAAAATATAGAAATGCTTCCCGCATGCTGGGTGATCAGTTAGCTCTTGCTTGGGTTGTGAAGTCAAAACCTCATTTTAATGCCAGCAGGTTTGCCAAAGCACTTCCTTTCTCTGAAGATATTGGGGGTACTTCAGTTTTGTTCTTACCTTGTTCTCTGTACAATTGGACTCCGCCTGAGGGTGCTGGTCAATTTCATGGCATGCCATTGGATGTTAAGGTTGTTCATTTTAAAGGATCAAGAAAACGTCTGATGCTCGAATCTTGGAATTTTTATTCCTCTTCTCTTGATATTTCAGACATGTTATGTCTCATTTTGGGAAGTGGAAGAACTAAATATGATTTTTGA 2343 0.3952 MALSSKHPHLFNHIRTFVNVKVKWVQDPYLDYAVLKEKDLKQTISLKNQIISSPSNSLSIYTASQLKASLNLPTTTSKFIDKYHCVFTQFQPGPGLPPAVKLTPQAFSIHKEEMAIHNSPTNREDSVQRLARFLMLAGMTKLPLYVIEKLKWDMGLPHDYVTTLLADYPDYFDICVVEDPSSGKELLALELVLWRKELSVSELEKRAMSLGYSGDKRRHDIAFPIFLPKGFDLEKRVKTWVENWQKLPYISPYEDAFHLDSNSDQAEKWAVAILHELLSLLVSKKTERDNLLCFGECLGLALRFKKALVHHPGIFYISNKIRTQTVVLREAYRNDFLVKKHPLKHHEQADLVDDHEVNKLISDLVDDYVVSIQTISLINQPQWWLIVDQIVAVGIQHENIQWMASFSFGLPLIFLLTHLFSVRELNINSKMEEPRKQLNKKFDHLILGPAAGQGLSNRLQCQGTKALNRIHSSNSRSGVDGSITFVTVFTIYNSSPNDVDDKSSNTVVGNASYDKFGRSMALLNVFINFIQVALPQNKVIILTDPVSDLSVQQNGVSLYPIEGEYSRDKLMLQRIRSYITFLETRLQNLSQKLKNITHYIFTDSDIAVVDDLGHIFRDHPNFHVALTFRNNKAQPLNSGFIAVRGTHEAILSAKLFLQEVLKVYSTKYRNASRMLGDQLALAWVVKSKPHFNASRFAKALPFSEDIGGTSVLFLPCSLYNWTPPEGAGQFHGMPLDVKVVHFKGSRKRLMLESWNFYSSSLDISDMLCLILGSGRTKYDF 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1003 780 Coils Coil 572 592 - -
Aed5g1003 780 Pfam Plant organelle RNA recognition domain 26 344 IPR021099 GO:0003723
Aed5g1003 780 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 522 763 IPR029044 -
Aed5g1003 780 PANTHER POLYPHOSPHATIDYLINOSITOL PHOSPHATASE 402 780 - -
Aed5g1003 780 SUPERFAMILY Nucleotide-diphospho-sugar transferases 523 748 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1003 Aed-Chr5 7910884 7917659 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1003 - - gmx:100785469 696.427