Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0983 ATGTGTTCCTTTAGCCAAAACAACTATGTTTTAGTTTGGTTCCTCATTCTCAGTACTGTCTTAACATCATCCCAAGTAATGTCTCGCAGTTGTTGGGCATTTTCAACTGTGGCTACAATTGAGGGTCTCAACCAAATAACTAAAGGTGAATTAGTGTCACTCTCAGAGCAAGAACTAGTAGATTGTGTGAAAGGAGATAGCGAAGGATGCTATGGTGGATATGTGGAAGATGCCTTTGAATTCATTGCCAAGAAAGGAGGAATAGCAAGTGAAACACACTACCCCTACAAAGGAAATAACAAGACTTGTAAGGTTAAGAATGAAACTGATCAATTAGGTGTAGTAGCTGAGATAAAAGGGTATGAGAAAGTTCCTTCTAATAATGAAAAGGCACTCCTAAAAGCTGTGGCACATCAACCTGTGTCAGCTTATGTTGAAGCTGGAGGATATGCTTTCCAATTTTACTCAAGTGGGATTTTTATAGGAAAGTGTGGAACTGATATAGATCATTCTTTTACTGTAGTTGGTTATGGAAAAGCTCGTGGTGGCAAAAAGTATTGGCTTGTGAAAAATTCGTGGGGAACTGAATGGGGTGAGAAAGGGTATATAAGGATGAAGAGGGACACACGTGCAAAGGAAGGTTTATGTGGAATTGCTACCAGTGCCTTATATCCAACTGCTTGA 684 0.3962 MCSFSQNNYVLVWFLILSTVLTSSQVMSRSCWAFSTVATIEGLNQITKGELVSLSEQELVDCVKGDSEGCYGGYVEDAFEFIAKKGGIASETHYPYKGNNKTCKVKNETDQLGVVAEIKGYEKVPSNNEKALLKAVAHQPVSAYVEAGGYAFQFYSSGIFIGKCGTDIDHSFTVVGYGKARGGKKYWLVKNSWGTEWGEKGYIRMKRDTRAKEGLCGIATSALYPTA 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0983 227 SMART pept_c1 17 226 IPR000668 GO:0006508|GO:0008234
Aed5g0983 227 Pfam Papain family cysteine protease 25 225 IPR000668 GO:0006508|GO:0008234
Aed5g0983 227 Gene3D Cysteine proteinases 21 227 - -
Aed5g0983 227 PRINTS Papain cysteine protease (C1) family signature 186 192 IPR000668 GO:0006508|GO:0008234
Aed5g0983 227 PRINTS Papain cysteine protease (C1) family signature 25 40 IPR000668 GO:0006508|GO:0008234
Aed5g0983 227 PRINTS Papain cysteine protease (C1) family signature 170 180 IPR000668 GO:0006508|GO:0008234
Aed5g0983 227 PANTHER SENESCENCE-ASSOCIATED GENE 12 28 226 - -
Aed5g0983 227 CDD Peptidase_C1A 30 225 IPR039417 -
Aed5g0983 227 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 186 205 IPR025661 -
Aed5g0983 227 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 28 226 - -
Aed5g0983 227 SUPERFAMILY Cysteine proteinases 25 227 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0983 Aed-Chr5 7626636 7627854 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0983 - K16292 gmx:100817009 374.4