Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0978 ATGAGTTCATTTAGCCAAAACCACTATGTTTTAGTCCTGTTCCTTATCCTGACTGTGCTAACATCCCAAGTAATGTCTCGCAGGTTGTCTGTGGCCAGCACTTCTGAGAGACATGAAAAGTGGATGGCACAGTATGGTAAGGTTTACAAGGATTCTGCTGAGAAAGAAAAACGTTTCGAAATATTCAAAAACAATGTGCAGTTCATTGAGTCATTCAATGCTGCTGGGGACAAACCTTTCAACCTTCGCATTAACCAATTTGCTGACCTTCATAATCATGAATTTAAGGCTTTACTAATTAATGGTCAGAAAAAGGATAATGGGATGGGGACAGCAATAGAAACAACATCATTTAGGTATGACAATGTCACTGACATTCCTGCTACCATGGACTGGAGAAAAATAGGTGCTGTTACTCCAATCAAGGACCAAGGCAGATGTGGTAGTTGCTGGGCATTTTCAGCTGTGGCTGCGATAGAAAGTATCCACCAAATCACTACAAGTGAATTGGTGTCACTCTCAGAGCAAGAATTGGTGGATTGTGTTGAAGGTGATAGCAAAGGATGCAATGGTGGTTATATGGAAGATGCCTTTGAATTCGTTGCAAAGAAAGGAGGAATAGCAAGTGAATCATACTACCCCTACAAAGGAAATAACAAGACTTCAACGCATCTGAGTGGAAACAGACACTATTCTGTTCAATGA 705 0.4071 MSSFSQNHYVLVLFLILTVLTSQVMSRRLSVASTSERHEKWMAQYGKVYKDSAEKEKRFEIFKNNVQFIESFNAAGDKPFNLRINQFADLHNHEFKALLINGQKKDNGMGTAIETTSFRYDNVTDIPATMDWRKIGAVTPIKDQGRCGSCWAFSAVAAIESIHQITTSELVSLSEQELVDCVEGDSKGCNGGYMEDAFEFVAKKGGIASESYYPYKGNNKTSTHLSGNRHYSVQ 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0978 234 Gene3D Cysteine proteinases 17 234 - -
Aed5g0978 234 SMART Inhibitor_I29_2 38 95 IPR013201 -
Aed5g0978 234 PANTHER SENESCENCE-ASSOCIATED GENE 12 26 225 - -
Aed5g0978 234 Pfam Cathepsin propeptide inhibitor domain (I29) 38 95 IPR013201 -
Aed5g0978 234 CDD Peptidase_C1A 127 221 IPR039417 -
Aed5g0978 234 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 26 225 - -
Aed5g0978 234 SUPERFAMILY Cysteine proteinases 36 230 IPR038765 -
Aed5g0978 234 Pfam Papain family cysteine protease 126 224 IPR000668 GO:0006508|GO:0008234
Aed5g0978 234 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 144 155 IPR000169 -
Aed5g0978 234 SMART pept_c1 126 233 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0978 Aed-Chr5 7579279 7582060 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0978 - - gmx:100814159 357.066