Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0976 ATGGCACAGTTACTGTCTCCAGTGTTCACAGAACCTCTCAGACTCCACAACACATCACAGAATTTATGTTCATGGAGGATGCTACCAAAGACTGCAACAACTCCTTTGAACTTTGTAACACACAATGGCAAACGAAGAGGGTGTGGAAGGGTAAGAGTTGCTGCTGAGGAAAAATCATTTTCAATGAGTGAGACTGTTGCAGATGACTACTATGCAGTTTTGGGCCTGCTTCCAGATGCTACTCCAGGGCAGATCAAGAAGGCCTATTACAATTGCATGAAATCTTGCCACCCAGACTTGAGTGACAATGATCCTGAGGCAACCAATTTCTGCATGTTCATCAATGAAGTCTATGGGGTGCTCAGTGATCCCATTCAGCGCATGATTTATGATGAAATTCATGGGTATTCTTTGACTTCAATCAATCCTTTTCTGGATGATTCTAGTCCAAAGGATCATGTTTTTGTTGATGAATTTAGCTGCATAGGCTGCAAAAACTGTGCCAATGTAGCCTGTGATGTGTTTGGAATAGAGGAAGAGTTTGGCAGAGCCAGAGCGTACAGCCAATGTGGGAAGCCTCAATTAGTTCAACAAGCTATTGATAGTTGCCCTGTTGACTGCATTCATTGGACATCAGCTGCACAACTATCATTGCTTGAAGACGAAATGCGCCGTGTAGAAAGAGTCAATGCAAGTTCCCGATGGGAAAAGAGGCAGGCAAAAGTCTTGGAACAAGCAAAATTGAGAATGATGAAGGAGAAAGGTTCTGTTCAAACAGATATGTTCTGGAACAATCTTTGGGGCAAACCAAAAGACTTAAGTTCAGAGGAGGAAATCAAAGAAAGAGCAAAGAGAGCTGCTGCTGCTGCTAGAAGATGGAGGGAATACTCAAGAAGAGGTGTTGATAAGCCTCCCACATTTAAACTTCCAGAAGCAGCCTCCATCAAGGACTAG 954 0.4329 MAQLLSPVFTEPLRLHNTSQNLCSWRMLPKTATTPLNFVTHNGKRRGCGRVRVAAEEKSFSMSETVADDYYAVLGLLPDATPGQIKKAYYNCMKSCHPDLSDNDPEATNFCMFINEVYGVLSDPIQRMIYDEIHGYSLTSINPFLDDSSPKDHVFVDEFSCIGCKNCANVACDVFGIEEEFGRARAYSQCGKPQLVQQAIDSCPVDCIHWTSAAQLSLLEDEMRRVERVNASSRWEKRQAKVLEQAKLRMMKEKGSVQTDMFWNNLWGKPKDLSSEEEIKERAKRAAAAARRWREYSRRGVDKPPTFKLPEAASIKD 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0976 317 MobiDBLite consensus disorder prediction 295 317 - -
Aed5g0976 317 SUPERFAMILY 4Fe-4S ferredoxins 153 210 - -
Aed5g0976 317 CDD DnaJ 69 123 IPR001623 -
Aed5g0976 317 PRINTS DnaJ domain signature 89 104 IPR001623 -
Aed5g0976 317 PRINTS DnaJ domain signature 106 126 IPR001623 -
Aed5g0976 317 PRINTS DnaJ domain signature 71 89 IPR001623 -
Aed5g0976 317 PANTHER OS01G0730500 PROTEIN 1 317 - -
Aed5g0976 317 Pfam 4Fe-4S single cluster domain of Ferredoxin I 156 210 - -
Aed5g0976 317 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 152 182 IPR017896 -
Aed5g0976 317 SUPERFAMILY Chaperone J-domain 68 133 IPR036869 -
Aed5g0976 317 Gene3D DnaJ domain 52 143 IPR036869 -
Aed5g0976 317 ProSiteProfiles dnaJ domain profile. 69 134 IPR001623 -
Aed5g0976 317 Pfam DnaJ domain 69 131 IPR001623 -
Aed5g0976 317 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 317 - -
Aed5g0976 317 SMART dnaj_3 68 126 IPR001623 -
Aed5g0976 317 Gene3D - 152 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0976 Aed-Chr5 7561903 7565934 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0976 - - gmx:100812547 557.37