Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0968 ATGGCGGCACTGAAGCTTCTCCTCTCCCAAGCTCGCAGCCATTCCTTCCCTAAAAGCGCTTCTCACTTCCACTCTCCTCTCTCTCTCATCTCTCACAGATCCCTCTGCTCTTCTTCCGAATCAAACTCAAACCCTCCCCGAAGATTCCCCGAACCAATCCCAATCCAACCCGTCTCCTACCCCGTCAAACCAAAACCCGAACCTCAACCCGAACCTGAGCCTTCACGCGAACAACAATCCCTCCGCCCTCCGCAGTCGGACACGCAACAGCGCGCGTTGACGCGCGAGGACATCCGCTACGTGAAGGACGCGCCGTCGATCGCGCCGGTGTCGTACACCGCGCGCAGCGTGGCGCCGCTCCCCGACGACAGGGCCCCAGCGGCTGCGGCGGAGGCGGAGGCGGAGAGCGAGAGGAGGATGATCGAGGCGGAGAATGAAATGAGGCTAAGAATGACGAAGGCCGTCGAAGAGGAACGGATGAAGGTGCCGTTTCCGCTGCTGATTAAGCCCAAGAAGAACGAGAAGCCGCCTCCGCTTGATTTGGCCGAAGTCATTCGCCAAGCCAATGCCAAGGCAAAGTTTGATGAAACTGTTGAAGCACATATAAGATTGGGTGTTGATTCAAAGCGAACAGAAATGGCAGTTCGTGGTACTGTGATTCTGCCTCATGGTGCTCCCAAGGCCGTCAGTGTGGCTGTTTTTGCAGAAGGAGCTGATGCAGAGGAAGCGAAAGCTGCAGGAGCTGATATAGTTGGTGGTAAAGAGCTTATTGAGGAGATTGCTAGTGGTAAAAATAAGCTCAAAGTCGACAAATGCTTCTCAACTCCTGGAATGGCACCTCATCTTGGAAAGATAGCACAATACCTTAGAAAGCGCAGACTGATGCCAGATAAGAAACTAGGTACTCTTACTAGTGATATTGCTGGCCAGTTGAAAGAGCTAAGACAAGGCCGTGTTGAGTTTAAAATGGAAAGTAAATCAATTTTGCATGCGGGACTTGGAAAGATAAGCTATAAAGAAGAGGCTCTACGGGAGAATATTAGTGCATTTATGAATGCGGTGTTGCTTGCAAAGCCTGCGGGTTTAAAGAAGACTTCCAAATATGCTGGGTATGTACTGTCTGTCCATATAAGCAGCACGATGGGCCCAGGATTACCTGTATCAATACAATCAATATCCAAAGCAGCAGATAACTACAAGAAAACGCATGTGGTATGA 1218 0.509 MAALKLLLSQARSHSFPKSASHFHSPLSLISHRSLCSSSESNSNPPRRFPEPIPIQPVSYPVKPKPEPQPEPEPSREQQSLRPPQSDTQQRALTREDIRYVKDAPSIAPVSYTARSVAPLPDDRAPAAAAEAEAESERRMIEAENEMRLRMTKAVEEERMKVPFPLLIKPKKNEKPPPLDLAEVIRQANAKAKFDETVEAHIRLGVDSKRTEMAVRGTVILPHGAPKAVSVAVFAEGADAEEAKAAGADIVGGKELIEEIASGKNKLKVDKCFSTPGMAPHLGKIAQYLRKRRLMPDKKLGTLTSDIAGQLKELRQGRVEFKMESKSILHAGLGKISYKEEALRENISAFMNAVLLAKPAGLKKTSKYAGYVLSVHISSTMGPGLPVSIQSISKAADNYKKTHVV 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0968 405 Pfam Ribosomal protein L1p/L10e family 188 383 IPR028364 -
Aed5g0968 405 MobiDBLite consensus disorder prediction 74 91 - -
Aed5g0968 405 Gene3D - 183 387 - -
Aed5g0968 405 PANTHER 54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL 1 403 - -
Aed5g0968 405 SUPERFAMILY Ribosomal protein L1 184 388 IPR023674 -
Aed5g0968 405 MobiDBLite consensus disorder prediction 47 68 - -
Aed5g0968 405 CDD Ribosomal_L1 181 387 IPR028364 -
Aed5g0968 405 MobiDBLite consensus disorder prediction 35 99 - -
Aed5g0968 405 Gene3D - 224 317 IPR016095 -
Aed5g0968 405 Coils Coil 127 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0968 Aed-Chr5 7501100 7506770 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0968 - - gmx:100809322 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0968 5 7501100 7506770 Aed5g0968 5 7501100 7506770 ECH