Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0967 ATGGCTACGGTTGATGTTATCAAGTCCTGCATCGATTCCATTAGACAGATGTCAGAGCATATTCAAGATGCTATTATTTATTTAGATGCTGGATCTACAGAAAGTTTCCAATTTATTGGGGCATATCAAGTACTTCTTGAACTTGGAGCACGGGCTATTTGCAGTTTGGAAAACATGTGTGCACTTGATGTGGTGGTTGATTGGAACTCAAAGTCTGATCCTGCAAGTAAACTTGTGGTTATCACATCAAGTCTACTAAGTGATGCACATCGGTATATTTTACGTTGCCTGAGCACACATCAAGTTGTTCGTCATTGCATTATATTTACATCTATCTCAGAGACAGCACACTCAGCATATCCTGATTCACCTCTGGGACCAGATGCATATCATGAATATGAATCCTTACTGGTTCAAGATTATGAAGAACTAGTTAAGAAGTCAGGGACAAAACCTGGACAGGCAAAACTTAACATTCAAGATGGAGGACGTTCAGAGTTTTCTTCCAGTGGAGAGGATGTTCTTAATCTTGAAGCTAGTTCAAGTGGAAGAGATTTTTACGAGCACAATCCATTAGACTACATTGAAGATGCAGTGCTGAAATTGGTTGTTTCTGTTCATCATTTTCCCATGATTTTATGCCCCATTTCACCACGAGTATTTGTTCTACCTTCAGAAGGGTTGGTGGCTGAAGCATACTTATCAGCTGAGCATGAAGATTCCATCAGTCCTGGTTTGCCCCCCTTAAGTACTGGCATGCTCTCTGATGCTGATGATGTGCCTCCAGGGGCTACGCTTACGGCTCACTTTCTCTACCATTTGGCTGCCAAGATGGACTTGAAAATGGAAATTTTCTCCATTGGTGATATATCAAAAACTGTGGGGAAAATTTTGACAGACATGTCAAGTCTTTATGACGTAGGCCGCCATAAACGATCAGCAGGGCTGTTACTCATTGATCGTACACTTGATCTTCTCACTCCTTGCTGTCATGGGGACTCACTTGTTGACCGTATGTTTTCTTCTTTGCCTCGTAGAAATAGAAATGCCCAAGGTAAAGGTTTAGGAAGCCAACTCAATCTTGGTTCTTCCTACCTGCAACGTGCTCCATTAGATGTTCAGATACCACTTGCAAAGATACTGAATGAAGAAGATTGGCAAATAGACAACTTTCGGCTTTTAGAAAGTGTTGAAGCTTTTATGTGTGGGTGGAATTCTGCTAATTCTGATTCTCAGATTGAAGGCTTGATTAACTTAAGCCAGAAAATTCATGACAAGCCTAGTCAATCAGATGTAGAGATACTTACTGGGTCATTTGTCTCCTCTGAAAATTTCCGTGGAATGCCATTATTGGAGGCTATTCTAGATAGAAGAACAAAAGATGGGGCCTTACTGGTAAAGAAATGGCTACAAGAAGCTCTACGCAGGGAAAATGTTACTGTGAATGTGAAGTCTCGTCCTGGTCTTGTTAAAAAGCCAGAGTTGCAAGCTATGATCAAAACTTTGTCCAAGAACCAATCATCTTTGCTAAGGAACAAAGGAATTATCCAATTAGCTTCAGCCACGTTGTTTGCCCTTGAGGAATCAAATTATGCTAAATGGGATGCAATTAGCAGTGCTGAGAAAATTCTGGGTGTAAGTTCTGGAGAAACTAGTCAAAGTCTTGCCATTCAAATTGGTGATCTCATCAATAAGAGTGCTCTGTTGGGATCACATGTAAATGAAGGGAAAAGGGAGATCTCAAAGGGGTTACTTTCTTTGCAAGATGCTTTGCTGTTGATGATCATTGGATATATATTAGCTGGTGAGAATTTTCCAACATCTGGTTCTGATGGGCCATTTTCTTGGCAAGAGGAACATTTGTTAAAAGAAGCTGTTGTAGATGCTCTTTTTGAAAATCCATCAACAGGAAATCTCAAGTTTCTAGATGGACTAAGGGAAGAGCTTGAAGCTAATGTAAGCAAGTCAAAATCAGACGAAGTAGCTGAAGAACTTTCAAAACTAGATATTGATGATTTTGATGATGATCAGTGGGGAAAATGGGGTGACGAAGATGGTGATGATGACAATAAAAATGAAAAAGTGTATAGTGACGTGCAACTGAAGTTGGATTTGCGTGATAGGGTGGATAACCTTTTCAAATTTCTTCATAAGTTATCTGATCTGAAAAGAAAGAATAAATCATTGAGGGATGGATCATTGACTACGGAAGCTAATTTTGATGAGGATAGAAAAGGATTACTTTATAAGCTACTAACGAGGGTGTTGGGCAAGTACGATGTGCCTGGGTTAGAATATCATTCTTCCACTGTGGGGCGCTTGTTTAAGAGTGGGTTTGGAAGATTTGGCCTTGGTCAGGCCAAACCAAGTCTTGCCGATCAGAATGTCATTTTGGTGTTTATTATTGGGGGCATTAATGGACTCGAGGTGCGCGAAGCTCATGAGGCATTGGCTGAAAGTGGAAGACCTGATATAGAGTTGCTTCTTGGTGGAACAACTCTTCTTACTTCCAATGACATGCTCGATTTACTGCTAGGGGACTCAAGTTACATTTAA 2556 0.4041 MATVDVIKSCIDSIRQMSEHIQDAIIYLDAGSTESFQFIGAYQVLLELGARAICSLENMCALDVVVDWNSKSDPASKLVVITSSLLSDAHRYILRCLSTHQVVRHCIIFTSISETAHSAYPDSPLGPDAYHEYESLLVQDYEELVKKSGTKPGQAKLNIQDGGRSEFSSSGEDVLNLEASSSGRDFYEHNPLDYIEDAVLKLVVSVHHFPMILCPISPRVFVLPSEGLVAEAYLSAEHEDSISPGLPPLSTGMLSDADDVPPGATLTAHFLYHLAAKMDLKMEIFSIGDISKTVGKILTDMSSLYDVGRHKRSAGLLLIDRTLDLLTPCCHGDSLVDRMFSSLPRRNRNAQGKGLGSQLNLGSSYLQRAPLDVQIPLAKILNEEDWQIDNFRLLESVEAFMCGWNSANSDSQIEGLINLSQKIHDKPSQSDVEILTGSFVSSENFRGMPLLEAILDRRTKDGALLVKKWLQEALRRENVTVNVKSRPGLVKKPELQAMIKTLSKNQSSLLRNKGIIQLASATLFALEESNYAKWDAISSAEKILGVSSGETSQSLAIQIGDLINKSALLGSHVNEGKREISKGLLSLQDALLLMIIGYILAGENFPTSGSDGPFSWQEEHLLKEAVVDALFENPSTGNLKFLDGLREELEANVSKSKSDEVAEELSKLDIDDFDDDQWGKWGDEDGDDDNKNEKVYSDVQLKLDLRDRVDNLFKFLHKLSDLKRKNKSLRDGSLTTEANFDEDRKGLLYKLLTRVLGKYDVPGLEYHSSTVGRLFKSGFGRFGLGQAKPSLADQNVILVFIIGGINGLEVREAHEALAESGRPDIELLLGGTTLLTSNDMLDLLLGDSSYI 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0967 851 SUPERFAMILY Sec1/munc18-like (SM) proteins 197 332 IPR036045 -
Aed5g0967 851 Gene3D - 170 334 IPR027482 -
Aed5g0967 851 SUPERFAMILY Sec1/munc18-like (SM) proteins 712 845 IPR036045 -
Aed5g0967 851 Gene3D - 714 845 IPR027482 -
Aed5g0967 851 PANTHER SEC1 FAMILY DOMAIN-CONTAINING PROTEIN MIP3 3 850 - -
Aed5g0967 851 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 3 850 IPR001619 GO:0016192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0967 - - gmx:100804041 1499.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0967 5 7494679 7500404 Aed5g0967 5 7494679 7500404 ECH