Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0966 ATGGCCACAGCCACCGCAACCGAGCCCACGTGGGCCGAGCTTCTGGGCCGCGACAACTGGGCCGGGCTACTAGACCCTCTCCACCCCTCCCTCCGCGCCCTGATCCTCCGGTGCGGCGACCTCATCCAGGCCACCTACGACGCCTTCATCAACGACAAGAACTCACCGTACTGCGGCGCGAGCCGCTACGGCAAGGCGTCGTTCTTCCGCAAGGTGATGCTGGACGACCCCGAGCACTACGACGTGGCGGCGTTCCTCTACGCCACGGCGAGGATCTCGGTGCCGGAGGCCTTCATCCTCCACTCGCTCTCACGCGAGGCCTGGGACCGCGAGTCCAACTGGATCGGCTACGTGGCGGTCACGTCAGACGCGCGGTCCCAAGAGCTCGGGAGGAGGGAGATCTACGTGGTGTGGAGAGGCACCACCAGAGACCTGGAGTGGATCAACGTGTTCGGAGCCAAGCAGGCGGACGCTTCAGGTTTGCTCAGTGACAAGAGCGTCCAAGAGTTGAAAGGTACTGCAGCAAACAAGGACGGTAGTAGTAGTAGCGACGAGGACGAAAACGGGTCTCAAAAACTGAGGGTGATGAGGGGTTGGCTGACAATCTACACCTCGGACAACCCGAAATCCCCATTCACAAAAACCAGCGCTCGAACGCAGCTTCAAGCGCAAGTGAAATGCCTCTTAAAGCGCTACAGGTCGGAGAATCCGAGCGTGGTGATCGTGGGGCACAGCCTGGGCGCAACCCTATCGATCGTGAGCGCATTCGACCTCGTGGAGAACGGCGTAACGGACATATCAGTCACCGCCGTGGTGTTCGGATCCCCGCAGGTCGGTAACAAAGCCTTCAACGATAAGTTCAACAGTTATCCGAAGTTGAAGGTTCTCCACGTGAGAAACGTGATCGACCTGATCCCGCACTACCCGGGGAAGCTGCTGGGGTACCAGTACACGGGGACGGAGCTGGAGATAGACACGAGGAAGTCGGGGAGCCTGAAGAACTCGTTGAACCCCGGCGACTGGCACAACCTCCAGGCCATGCTGCACGTGGTGGCGGGGTGGAACGGGGTGAACGGCGCGTTTGAGTTGAAGGTGAAGAGGAGCGTGGCTCTGGTGAACAAGTCGTGTGAGTTTTTGAAGGAGGAGTATGGCATCCCTGGGTCGTGGTGGGTGGAGAAGAATACAGGGATGGTGAAGAGGGAGGATGGAGAGTGGGTTTTGGACGCGCCGGATAAGGAGGATGTGCCCGTGCCCGAAGATGATATTATTGATTGA 1275 0.5945 MATATATEPTWAELLGRDNWAGLLDPLHPSLRALILRCGDLIQATYDAFINDKNSPYCGASRYGKASFFRKVMLDDPEHYDVAAFLYATARISVPEAFILHSLSREAWDRESNWIGYVAVTSDARSQELGRREIYVVWRGTTRDLEWINVFGAKQADASGLLSDKSVQELKGTAANKDGSSSSDEDENGSQKLRVMRGWLTIYTSDNPKSPFTKTSARTQLQAQVKCLLKRYRSENPSVVIVGHSLGATLSIVSAFDLVENGVTDISVTAVVFGSPQVGNKAFNDKFNSYPKLKVLHVRNVIDLIPHYPGKLLGYQYTGTELEIDTRKSGSLKNSLNPGDWHNLQAMLHVVAGWNGVNGAFELKVKRSVALVNKSCEFLKEEYGIPGSWWVEKNTGMVKREDGEWVLDAPDKEDVPVPEDDIID 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0966 424 Gene3D alpha/beta hydrolase 10 420 IPR029058 -
Aed5g0966 424 Pfam Lipase (class 3) 135 311 IPR002921 GO:0006629
Aed5g0966 424 SUPERFAMILY alpha/beta-Hydrolases 108 333 IPR029058 -
Aed5g0966 424 CDD Lipase_3 97 325 - -
Aed5g0966 424 PANTHER PHOSPHOLIPASE A1-IIGAMMA 7 419 IPR033556 GO:0008970
Aed5g0966 424 PANTHER PHOSPHOLIPASE A1-IIDELTA 7 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0966 Aed-Chr5 7487099 7489338 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0966 1 419 Acyl Lipid Metabolism Gene Families AT2G42690 60.900 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0966 - - gmx:100809529 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0966 5 7487099 7489338 Aed5g0966 5 7487099 7489338 ECH