Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0946 ATGGGCGACGGCACCACCGTGAGCCACCTGCCGGAGGAGATACTGTTGAACGTGTTCACCGCCGTGTCCGACACGCGCACGCGGAACGCGTTGTCGTTGGTTTGCCGGAGCTTCTTCAGGTTGGAGCGCAAGACGCGGACCACACTCACGCTCCGCGGCAACGCGCGTGACCTCCACCTCATCCCGACCTCCTTTACGCACGTCACGCACCTCGACCTCTCCTTCCTCTCGCCCTGGGGCCACGCACTCTTCTGCTCCTCCTCCTCCGCCAACACCGCCTTCGAGCCCCTCCTCGCACGCCGCCTCCGCGACGCGTTCCCGCGCGTCACCTCGCTTGCTATCTACGCGCGTGCCCCGGCCACTCTCCACCTCCTCCTCCTCTCCCCCTGGCCGCAGCTCTCCTCCGTCAAGCTCGTCCGGTGGCACCAGCGCCCGCTGACCTCGCAGGGTGGATCCGACTTCGCCTCGCTCTTCTCGAAGTGCCGATCACTCGCCTCGCTCGACCTCTCCTCCTTCTACCACTACACGGAGGACCTCCCACCGGTGCTCACGGCGAACCCTATCTCCGCCGCCTCACTCCGCCACCTCAACCTCTTAACAACCTCCTTCACGGAGGGATTCAAGTCTTCTGAAATCGAATCGATCACCGCGTCGTGCCCTAACCTGGAGCACTTTCTAGTGGCCTGCACCTTCCATCCGAGATGTATAGGGTTCGTCTGCGACGATACACTGATTGCTATCTCATCCAATTGCCCGAAGCTCTCGCTGCTTCACATGGCCGATGCGTCGTCGTTTTCGAGTCGCAGAGAGGACGAGGGTTTCGGCGGAGAAGACGCTAGCGTTAGCGGCGCTTCTCTCGAGGCTCTGTTCTCTGGACTTCCTCTTTTGGAAGAGCTAGTGTTAGATGTTTGTAAAAACGTTAGAGAGAGTAGTATCGCTTTGGCAGTGTTGGGTTCCAAGTGCCCTAAGCTGAGGGTTCTGAAGTTGGGACAGTTTCAAGGGATTTGCTTGGCCTCTGAATCTCGCCTTGACGGAATTGCCCTTTGTCATGGGCTTCAATCCTTGTCTGTTGTAAACTGCGCGGACCTTGATGACATGGGGTTGATTGAGATTGCCAGAGGGTGTTCAAGATTGGTTAGGTTCGAGCTTCATGGTTGCAGGCTTGTGACGGAGCGTGGACTCGGGACCATGGTTTGCTTGCTTTGTAGGACTCTGATTGATGTCAAAGTTTCTTGCTGTGTCAACCTCGACACTGCCGCCATTCTCAAAGCTCTGGAGCCCATTCGGGAGAGGATTGAGCGGCTCCATGTGGATTGTGTGTGGAATGGGTTGAAGGAAAGCGATGGCTTGGGACAGGGGTTTCTTAATTTTGATCTGAATGGTTTGGATGAAGATGAACTCATGGATTACTTTGGGGGTGGTGAAGAATGTGAGAACGCAAGCAAAAGGAAGAGGCAGAGATGCAATTACGAAATGGGGGGCGATGATTCCTTTTTGGAAAGCAATGGCAATGGCAATGGCAATGGTGGTTTCTACGGAAAGATCTGGGACAAGCTGCAGTATCTTTCTCTTTGGATAAAAGTTGGTGATCTCTTGACACCTTTACCAGTGGCAGGGTTAGAGGATTGTCCTGTCTTAGAAGAGATTCTAATAAAGGTCGAAGGAGATAGCAGGGGGCAGCCAAAGCCAGCAGAGAGCGAATTCGGTCTGAGCATTCTTGCCTGTTATCCTCAGCTACTGAAGATGCAGCTGGATTGTGGTGACACCAAAGGTTATGCGCTCACTGCACCATCGGGGCAAATGGATTTGAGCCTGTGGGAGAGGTTTCTTCTGAATGGTATTGGCAGCTTGAGTCTCAGTGAGCTTCATTACTGGCCACCACAAGATGAGGATGTGAACCAGAGGAGTGTGTCGCTTCCAGCTGCTGGCTTGCTTCAGGAATGTTACACTTTGAGGAAGCTCTTCATTCATGGAACTGCTCATGAACATTTCATGAATTTTTTTCTCAAGATACCAAACCTGAGGGATGTACAGCTGAGGGAGGATTACTATCCTGCGCCAGAGAATGACATGAGTACAGAGATGAGGGTAGGTTCGTGCAGCCGCTTTGAAGATGCACTGAATAGGCGTCGAATCTGTGATTGA 2145 0.5385 MGDGTTVSHLPEEILLNVFTAVSDTRTRNALSLVCRSFFRLERKTRTTLTLRGNARDLHLIPTSFTHVTHLDLSFLSPWGHALFCSSSSANTAFEPLLARRLRDAFPRVTSLAIYARAPATLHLLLLSPWPQLSSVKLVRWHQRPLTSQGGSDFASLFSKCRSLASLDLSSFYHYTEDLPPVLTANPISAASLRHLNLLTTSFTEGFKSSEIESITASCPNLEHFLVACTFHPRCIGFVCDDTLIAISSNCPKLSLLHMADASSFSSRREDEGFGGEDASVSGASLEALFSGLPLLEELVLDVCKNVRESSIALAVLGSKCPKLRVLKLGQFQGICLASESRLDGIALCHGLQSLSVVNCADLDDMGLIEIARGCSRLVRFELHGCRLVTERGLGTMVCLLCRTLIDVKVSCCVNLDTAAILKALEPIRERIERLHVDCVWNGLKESDGLGQGFLNFDLNGLDEDELMDYFGGGEECENASKRKRQRCNYEMGGDDSFLESNGNGNGNGGFYGKIWDKLQYLSLWIKVGDLLTPLPVAGLEDCPVLEEILIKVEGDSRGQPKPAESEFGLSILACYPQLLKMQLDCGDTKGYALTAPSGQMDLSLWERFLLNGIGSLSLSELHYWPPQDEDVNQRSVSLPAAGLLQECYTLRKLFIHGTAHEHFMNFFLKIPNLRDVQLREDYYPAPENDMSTEMRVGSCSRFEDALNRRRICD 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0946 714 Gene3D - 6 46 - -
Aed5g0946 714 PANTHER UNCHARACTERIZED 4 689 - -
Aed5g0946 714 PANTHER F-BOX PROTEIN MAX2 4 689 - -
Aed5g0946 714 Pfam F-box 8 47 IPR041567 -
Aed5g0946 714 SMART LRR_CC_2 349 374 IPR006553 -
Aed5g0946 714 SMART LRR_CC_2 375 400 IPR006553 -
Aed5g0946 714 SUPERFAMILY F-box domain 3 43 IPR036047 GO:0005515
Aed5g0946 714 SUPERFAMILY RNI-like 66 419 - -
Aed5g0946 714 Gene3D Ribonuclease Inhibitor 47 452 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0946 Aed-Chr5 7345103 7347247 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0946 - - gmx:100807914 1210.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0946 5 7345103 7347247 Aed5g0946 5 7345103 7347247 ECH