Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0898 ATGAGCCATGTCGTGAAAAGATTGCTATTGGGTCTTGGGGCCAACCCTGCCGTGCACGAGGTGGAGGAGAGTGATGAAGGGGGTGTTGTTAGAGAATTGGAAGCAATTGTGGGTGCCAATAACGATGATGGAGGGAATAGTAAGATGCAATTTCCAGCGGTTTTTATTGGTGGCAAATTGTTTGGGGGATTGGAACGTGTTATGGCTACTCATATTTCAGGGGAATTGGTTCCAATTCTCAAACAAGCAGGGGCTCTATGGCTTTAA 267 0.4644 MSHVVKRLLLGLGANPAVHEVEESDEGGVVRELEAIVGANNDDGGNSKMQFPAVFIGGKLFGGLERVMATHISGELVPILKQAGALWL 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0898 88 ProSiteProfiles Glutaredoxin domain profile. 1 87 - -
Aed5g0898 88 PANTHER GLUTAREDOXIN-C9 1 88 - -
Aed5g0898 88 PANTHER GLUTAREDOXIN 1 88 IPR011905 -
Aed5g0898 88 Gene3D Glutaredoxin 1 87 - -
Aed5g0898 88 SUPERFAMILY Thioredoxin-like 2 87 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0898 Aed-Chr5 6838720 6838986 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0898 1 88 Miscellaneous Gene Families AT3G02000 50.000 3.98e-20 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0898 - - gmx:100527118 154.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0898 5 6838720 6838986 Aed5g0898 5 6838720 6838986 ECH
Aed1g0784 1 8749975 8750448 Aed5g0898 5 6838720 6838986 PCT