Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0877 ATGGCAGTGACTGAGGGAACCGGCGGCGCCACCGTGATCGACGAGACCTACGAGTTCTCGGCGCCGCGATTCTTTGATTTCATCAAAGGAGAGTCTGATGAGGAATCACATAAGACTGAGCTCTGGTTCGACACCGCTCTCTCCTACGCTCCTTCGCCATTCATGCCTAAAATCAAGACTGGTAGATCTATTACTGTAGATAGCTTGTGTGATTTCAGCGAAGCTGACAAAATGCAGAAGATGTTAGCTAGTGTTGATGATAATATTCTGGAAGACAATACACAACCACAGAGCAACACCACCAAAACAGAGGAAGATGAAGCTGACAAAGTGCAGAAGGTAAAGGAGAATGATGCACCTTGCCCTGGTAAAGAAGGAAGTGAGAATGATGATAAAGGAGCATGCTTAAGGGTTTCATCTGGAGGAGCATCTTCTGAAGCAAAAGATGCATGCACACCAAAACCAGCATTGCTGAAAAAAGTTGCCACATCCACCAATTCCAAGAAGACACAGAATAAGATGGCCACAAACACAAAATCTCAGCTAAAGTCGGCAACAGTGAAGAGCATTGCTGGGACTCCTCACTTGGCCCAGGAGAATCAAGCCATTAAGAGGCAAAAATTGGACGGAGGAAAATCTAGACAGATTCTGAATGTCAAACATCAAACTTTGGCACATAATAAGTCAAAATTGGGTTTGACACTATCTTCTAGCACTAGTAAACCTCACAAAGAGGACAGAAAGGTTTATGTTCGTGAAACACCAACAACACCAGCCTCTGTACCATTTGTATCAATGGCAGAAATGATGAAAAAATTTCAATCTAGTACCAGAGATATGTCATTTCTCCGCACTGTTTCTCATACAAAACCAAAACTTACATTGACTAGGCCTAAGGAACCTGAATTTGAGACATCTCAGCGGATTCGCCCAGCTAGGGTGAAGAGTAGTGCTGAGCTTGAGGAAGAAATGATGGCTAAATTGCCAAAATTCAAGGCTAGACCATTGAATAAGAAGATTTTGCAAACTGCAACTTTGCCTCCTGTTCCAAGAAGTACACCAAAGCTACCAGAATTTAAGGAATTTCATCTGGAAACTTTGGCTAGGGCACATCAGAATGCAGATACAGCTTCCATAGCTTCAACAGAGGTATCTCATAAGGAGAGTTCGTGGAAGCCTCATCTTACAGAACCAAAAACACCTTTACTCCAAACTTCACTAAGAGCCCGCCCACCCAAGGTGAAAACCTCATTAGAATTAGAGCAAGAGGAACTCGAAAAGATCCCTAAATTCAAGGCAAAACCTCTAAATAAGAAGATCTTTGAAAGTAAAGGGGATATTGGAGTATTCTGCAATACCAAGAAACATGTTACTGAACCTCAAGAATTTCACTTTGCCACAGATGAAAGGATTCCGCCACCACCTATTTCCATGGCTGATTTATTTAGCAAGCTTTCTTTGAAGTCTGGACCTGCACGTAATCACAACCCAATCCCAAGAAACACGATTCCAAATCCATTTAATCTCCACACAGAGGAAAGAGGTGCTGAGAAAGAGAAGAAACTGGTCATGGGACTTCTGCATAAACAGTTTGAAGAGGAAATCGCAAGGATTCCCAAGGCTAATCCATACCCTTACACCACTGATTACCCTGTGATCCCACCAAAACCAGAACCAAAGCAATGCACAAGACCAGAGCCATTCCAATTGGAGAGCCTGGTGAGACATGAGGAAGAAATGCAAAAGGAACAGGAAGAAAGACTCAGAATGGAAAAGGAAGAGGCCCAGATGAGAGCGTTTAAGGCACAACCAATCTTGAAAGAGGATCCAATCCCTGTTCCAGAGAAGGTTCGCAAACCCCTCACACAAGTTCAGCAATTTAGTTTACATGTGAATCATCGGGCTGTGGATAGAGCACAATTTGATGAAAGGATTAAGGAAAAAGAAATGATGTACAAACGATACAGAGAAGAGAGTGAAGCAGCAAAAATGATAGAGGAAGAGAAAGCATTGAAACAGATGAGAAGGACAATGGTTCCACATGCTAGGCCAGTTCCTAATTTTGATAATCCATTTTGTCCCCAAAAGTCTTCAAAGGACATAACAAAACCCAAGTCACCAAATTTGCGGGTACTCCATAGAAAGCAGCAAAGAAGGAAGGTATTCAATGGAACTGTGGTCTCGAGTCCAGCTGCTAACATGAGATGA 2208 0.4271 MAVTEGTGGATVIDETYEFSAPRFFDFIKGESDEESHKTELWFDTALSYAPSPFMPKIKTGRSITVDSLCDFSEADKMQKMLASVDDNILEDNTQPQSNTTKTEEDEADKVQKVKENDAPCPGKEGSENDDKGACLRVSSGGASSEAKDACTPKPALLKKVATSTNSKKTQNKMATNTKSQLKSATVKSIAGTPHLAQENQAIKRQKLDGGKSRQILNVKHQTLAHNKSKLGLTLSSSTSKPHKEDRKVYVRETPTTPASVPFVSMAEMMKKFQSSTRDMSFLRTVSHTKPKLTLTRPKEPEFETSQRIRPARVKSSAELEEEMMAKLPKFKARPLNKKILQTATLPPVPRSTPKLPEFKEFHLETLARAHQNADTASIASTEVSHKESSWKPHLTEPKTPLLQTSLRARPPKVKTSLELEQEELEKIPKFKAKPLNKKIFESKGDIGVFCNTKKHVTEPQEFHFATDERIPPPPISMADLFSKLSLKSGPARNHNPIPRNTIPNPFNLHTEERGAEKEKKLVMGLLHKQFEEEIARIPKANPYPYTTDYPVIPPKPEPKQCTRPEPFQLESLVRHEEEMQKEQEERLRMEKEEAQMRAFKAQPILKEDPIPVPEKVRKPLTQVQQFSLHVNHRAVDRAQFDERIKEKEMMYKRYREESEAAKMIEEEKALKQMRRTMVPHARPVPNFDNPFCPQKSSKDITKPKSPNLRVLHRKQQRRKVFNGTVVSSPAANMR 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0877 735 Coils Coil 638 658 - -
Aed5g0877 735 MobiDBLite consensus disorder prediction 86 133 - -
Aed5g0877 735 Pfam Targeting protein for Xklp2 (TPX2) domain 627 702 IPR027329 -
Aed5g0877 735 PANTHER TARGETING PROTEIN FOR XKLP2 14 693 IPR009675 GO:0005819|GO:0005874|GO:0032147|GO:0060236
Aed5g0877 735 PANTHER PROTEIN TPX2-RELATED 14 693 - -
Aed5g0877 735 Coils Coil 573 603 - -
Aed5g0877 735 Pfam Cell cycle regulated microtubule associated protein 293 465 IPR027330 -
Aed5g0877 735 MobiDBLite consensus disorder prediction 102 132 - -
Aed5g0877 735 MobiDBLite consensus disorder prediction 682 709 - -
Aed5g0877 735 MobiDBLite consensus disorder prediction 163 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0877 Aed-Chr5 6652472 6657996 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0877 K16812 - gmx:100801192 1247.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0877 5 6652472 6657996 Aed5g0877 5 6652472 6657996 ECH