Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0856 ATGTTGCATAAGGTGTGCAAGAGATACAGAATCATGGCGAGTGGAAATGGTTTGTTTTATCACGTTGTGGGGTTTGCATCGATCGTGTTGTTCATTTACATGTCTTTTGGAGAAGTGAGGTTTGGTTTTGAGGAACAACCGGAATTGGCTTTTGTGGAGAGAAATGGGACTCAGTTTATGGTGGATGGAAATGCTTTCTATATTAATGGGTGGAACTCTTATTGGTTAATGGTGCAATCTGTGGATGGGTATTCCAGGCCAAAGGTGCGTGAAATGCTCAGGGCTGGGGCCAAGATGGGGCTCACTGTGTGTAGAACTTGGGCCTTCAATGATGGTGACTACAATGCCCTTCAGAGTTCTCCTGGTGTCTTCAATGAACAAGCTTTCAAGGCCTTGGACTATGTTATAGCAGAAGCAAGGCAACATGGAATTCGGCTCCTCCTTAGCTTAGTAAATAACTTGCATGCATATGGTGGGAAGACTCAATATGTCAAATGGGCATGGCAAGAAGGGGTTGGGTTAAGCTCGTCTAACGATTCTTTCTTCTTTGATCCATCAATCCGTAGTTATTTCAAGAATTACATCAAGACAATTCTGACAAGGAAGAATACTATAACTGGAATTGAATATAGAAATGACCCCACCATTTTTGGTTGGGAATTGATTAATGAACCTCGGTGCATAACTGATCCTTCTGGTGATACTCTCCAAGATTGGATAGAGGAAATGTCAGCTTTTGTCAAATTGATCGACAAGCGCCATCTTGTGACTGTTGGACTTGAAGGTTTCTATGGTCCTAATGATCCAAAAAGATTGACTGTGAACCCTGAGGATTGGGCATCTAGACTTGGATCTGACTTTATAAGGAACTCCAAAATCTCAGATATTGACTTCACCTCTGTCCATATCTATCCTGATCACTGGTTTCATCATCAGGTATTTGAAGACTACATGAAATTTGTCTCCAAATGGATGCTTTCTCACATTGAAGATGGCGACAAGGTATTGAACAAGCCAGTCTTGTTCTCTGAATACGGATTGTCGGACATAAATTTTACAATGTCTGAACGAAAAACGATGTACAAAACAATTCTAGACATAAGCCACAAATCTGCAAAGAAAAACAGGTCTGGAGCAGGTGCTCTAGTTTGGCAATTCTTAGTTGGAGGAATGCAGGAGTTCACTGATGATTTTGGGATCACCCCATGGGAAAAGTCACCAATCCCTTCACTATTTATTGAACAATCATGCAGAATAGCCAAGGTCAAAGGATGGCCTCACAAGGACACAAGTTTTAAACAATTTTGTTAG 1311 0.4127 MLHKVCKRYRIMASGNGLFYHVVGFASIVLFIYMSFGEVRFGFEEQPELAFVERNGTQFMVDGNAFYINGWNSYWLMVQSVDGYSRPKVREMLRAGAKMGLTVCRTWAFNDGDYNALQSSPGVFNEQAFKALDYVIAEARQHGIRLLLSLVNNLHAYGGKTQYVKWAWQEGVGLSSSNDSFFFDPSIRSYFKNYIKTILTRKNTITGIEYRNDPTIFGWELINEPRCITDPSGDTLQDWIEEMSAFVKLIDKRHLVTVGLEGFYGPNDPKRLTVNPEDWASRLGSDFIRNSKISDIDFTSVHIYPDHWFHHQVFEDYMKFVSKWMLSHIEDGDKVLNKPVLFSEYGLSDINFTMSERKTMYKTILDISHKSAKKNRSGAGALVWQFLVGGMQEFTDDFGITPWEKSPIPSLFIEQSCRIAKVKGWPHKDTSFKQFC 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0856 436 Gene3D Glycosidases 48 423 - -
Aed5g0856 436 PANTHER GLYCOSIDE HYDROLASE FAMILY 5 PROTEIN 15 436 - -
Aed5g0856 436 SUPERFAMILY (Trans)glycosidases 51 413 IPR017853 -
Aed5g0856 436 Pfam Cellulase (glycosyl hydrolase family 5) 79 385 IPR001547 GO:0004553|GO:0071704
Aed5g0856 436 PANTHER - 15 436 IPR045053 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0856 Aed-Chr5 6463098 6467972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0856 14 436 Glycoside Hydrolase AT2G20680 68.471 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0856 K19355 - gmx:100811461 878.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0856 5 6463098 6467972 Aed5g0856 5 6463098 6467972 ECH