Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0847 ATGGTCAACCTCACTCTCTCTCAATATGCCAAAGAGAAGTCAAAACATGATGATGGGATAATGAAGGATATTACAAAAGAAACAAATAAACATGAGGACACTCCGCTGCACGAGGCACTGTACAGTGGGGATGTTGATGTTATAAAGGAGATTTTGGATGCAGATAAGGAAGTGGTTCATTGTTTGAACAAGTCAAAGCGATCACCGTTGTATTTGGCAGTTGTGAATGGGAATGTGGAAATTCTGAATCTTCTATTGGAAGTTCCATTCCCTGCAGATCAGCCTCTTCCTAACTGCCTTGGAAACTCTCCACTCCATGCAGCTATACTGGAACATAATCATGTTATAATGGAAGAAATAATAGCTAAAAGACCAGAGCTAGTTTATTTAAGGGATGGAAATGGAAATACTGCCCTTCATTATGCAGCTGACATTGGTTATGTTCCGGGATGTCATGTATTATTAAAAAATTCACCATTGCAAGTAAAATTTGATCAAACAGTCTTGGAACAAAACAAGAAGGGTAATCTTCCCATTCATCTTGCTTGCAAAAAAGGTCATGTCGAGGTGGTCAAAGAATTCTTTAAACAAGAATGGTGCATAAATCATTACGATCTCCTCAATCAAAAAGGTCGAAACATTCTTCATATTGCGGCAAAGAATGGAAAAAGTAAACTGGTAGGATACCTATTAAAAAATAGAAAAATTGGTGATTCATGTAGCATAAATCAGAAAGATAATGATGGAAACACTCCATTACATTTGGCATCAAAAAATTTATTTCCACTCACTAGCTACCTTATTGCACGAGATAGAAAGACGAATCTTTTATGTGGCATGGTATTAAGAAAAGCTGGCGTGACCGTGAAGCAAACTCGCTTTGTGAATGTTAAAAAAAGAGATACCTCAGAGCCATTTTTAATCGTTGCGGCGTTGATGATGACAGTGACATTTGCAGCTGCTTTTACTGTGCCAGGAGGTGTATATAGCTCTGATGACAAAAATCCCAAACTTAGAGGTGCTGCAGTTTTGTCTCACAAACCATTATTCTGGGTTTTCACCATCTTCAATATCATAGCTATGTTTAGCTCTGCAATTGCATGTGGATCTTTGTCGTTGGGATTAGTTCTTCCGTCTGAATATGCTGAAATATATGATATTCCACTCACTTGTCTGGTATATGCCTTTGTCACAGCACCAGTGGCATTTGTAGCTGCTGTACTTCTACTTGTGGCCAATAACCTTTCTCTCACATTTGCTACAACCATCATTGGATGCCTGTGCATTTTCTACACCTTTATACATACATTCATCCCAGTTCTAAGTGCACAACTTCTGCTTCGAGTTCTTGTTTTGTCAAAAAAAGTTCCTCTACTTCGTCGTCTTATTTATAGATACGTGTCTCTTTTGTGTTTATTCAACCTTTCCAAGGAAAAAAATTATCGTAAGCCCAAAATTAATATTCCTCATTCTCAGAAAGAAAACAAGGACGACAAGGGCAATCGATTAGAAGAGCATGTGCCGGTGCAACAAGGCAAATGA 1542 0.3813 MVNLTLSQYAKEKSKHDDGIMKDITKETNKHEDTPLHEALYSGDVDVIKEILDADKEVVHCLNKSKRSPLYLAVVNGNVEILNLLLEVPFPADQPLPNCLGNSPLHAAILEHNHVIMEEIIAKRPELVYLRDGNGNTALHYAADIGYVPGCHVLLKNSPLQVKFDQTVLEQNKKGNLPIHLACKKGHVEVVKEFFKQEWCINHYDLLNQKGRNILHIAAKNGKSKLVGYLLKNRKIGDSCSINQKDNDGNTPLHLASKNLFPLTSYLIARDRKTNLLCGMVLRKAGVTVKQTRFVNVKKRDTSEPFLIVAALMMTVTFAAAFTVPGGVYSSDDKNPKLRGAAVLSHKPLFWVFTIFNIIAMFSSAIACGSLSLGLVLPSEYAEIYDIPLTCLVYAFVTAPVAFVAAVLLLVANNLSLTFATTIIGCLCIFYTFIHTFIPVLSAQLLLRVLVLSKKVPLLRRLIYRYVSLLCLFNLSKEKNYRKPKINIPHSQKENKDDKGNRLEEHVPVQQGK 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0847 513 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 23 275 - -
Aed5g0847 513 PANTHER ANKYRIN REPEAT-CONTAINING PROTEIN ITN1-LIKE 293 436 - -
Aed5g0847 513 SMART ANK_2a 174 203 IPR002110 GO:0005515
Aed5g0847 513 SMART ANK_2a 65 94 IPR002110 GO:0005515
Aed5g0847 513 SMART ANK_2a 248 276 IPR002110 GO:0005515
Aed5g0847 513 SMART ANK_2a 210 244 IPR002110 GO:0005515
Aed5g0847 513 SMART ANK_2a 134 164 IPR002110 GO:0005515
Aed5g0847 513 SMART ANK_2a 100 129 IPR002110 GO:0005515
Aed5g0847 513 SMART ANK_2a 31 61 IPR002110 GO:0005515
Aed5g0847 513 ProSiteProfiles Ankyrin repeat profile. 174 206 IPR002110 GO:0005515
Aed5g0847 513 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 293 436 - -
Aed5g0847 513 ProSiteProfiles Ankyrin repeat profile. 65 87 IPR002110 GO:0005515
Aed5g0847 513 SUPERFAMILY Ankyrin repeat 20 259 IPR036770 -
Aed5g0847 513 ProSiteProfiles Ankyrin repeat profile. 210 233 IPR002110 GO:0005515
Aed5g0847 513 ProSiteProfiles Ankyrin repeat region circular profile. 210 233 - -
Aed5g0847 513 Pfam Ankyrin repeats (many copies) 33 86 IPR002110 GO:0005515
Aed5g0847 513 Pfam Ankyrin repeats (many copies) 102 155 IPR002110 GO:0005515
Aed5g0847 513 Pfam Domain of unknown function 300 408 IPR026961 -
Aed5g0847 513 MobiDBLite consensus disorder prediction 486 513 - -
Aed5g0847 513 ProSiteProfiles Ankyrin repeat region circular profile. 65 87 - -
Aed5g0847 513 Pfam Ankyrin repeats (3 copies) 179 268 IPR002110 GO:0005515
Aed5g0847 513 Gene3D - 2 303 IPR036770 -
Aed5g0847 513 PANTHER ANKYRIN REPEAT-CONTAINING PROTEIN ITN1-LIKE 23 275 - -
Aed5g0847 513 MobiDBLite consensus disorder prediction 486 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0847 Aed-Chr5 6398828 6402020 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0847 20 412 Miscellaneous Gene Families AT3G09550 28.538 3.01e-26 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0847 - - gmx:102659999 481.1