Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0821 ATGGGTTTTGAAGTCACAACTCCAACGGTGGCACTCTTTAATACTACTACTACTACTCAGAGACCAGACCATTGGAAGCATTTTGATGACTCCATGAATGCAGTGTCTTTTGGGTTTGTTGCCACTGCTATCCTCATTTCTATGTTTCTTCTTCTGGCTATCTTTGAGAGGTTTCTTAGGCAAAGATCAAGTGTTGCAACTCCAATAGATCTTGAACACCAAATGCACTTTGGTGGAAAGTTGGAAAATTTATCATCCAAGGTGCACTTTAGCACACGCCCTTCCTTTGATTTCGTTTACTATGATGGTACTGATTTGAATTTCTGTTCAAGTACTCAGATGACCATTTATGGAAGAGGTGTATTAGTGTTGATGCCTGGAGAGAAGATTCCTTCATTCATTGCACTTCCTGCTCCTGCTCCTGCACCATGTCACCGCGAGCCGATGTCATGGCCTATTCAACATAACTCATGCTTCCATACACCTTTAGCATCATCAATGAGGGAATATAATCTAACAAAGTTGCGTGGTGTTCAAGCTGCTAAGAAATTGCTGTTTTGA 561 0.4135 MGFEVTTPTVALFNTTTTTQRPDHWKHFDDSMNAVSFGFVATAILISMFLLLAIFERFLRQRSSVATPIDLEHQMHFGGKLENLSSKVHFSTRPSFDFVYYDGTDLNFCSSTQMTIYGRGVLVLMPGEKIPSFIALPAPAPAPCHREPMSWPIQHNSCFHTPLASSMREYNLTKLRGVQAAKKLLF 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0821 186 PANTHER - 107 157 - -
Aed5g0821 186 PANTHER - 6 90 - -
Aed5g0821 186 ProSiteProfiles CRIB domain profile. 65 78 IPR000095 -
Aed5g0821 186 PANTHER CTTNBP 2 AMINO-TERMINAL-LIKE PROTEIN 107 157 - -
Aed5g0821 186 PANTHER CTTNBP 2 AMINO-TERMINAL-LIKE PROTEIN 6 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0821 Aed-Chr5 6189974 6192194 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0821 - - gmx:100306720 223.016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0821 5 6189974 6192194 Aed5g0821 5 6189974 6192194 ECH