Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0817 ATGACTTCCCAACACGAAAACGGGTCGAATATAGACCCGAATCATATTGAGGTGGAGACAGCAATGGTTTCCCAGCTCGAAAACGGGTCGAAAATTGACCCGAATCCTATTAGGGTGGAAACCCAGGAAGCGGAGGCTGAAAAGTTTGGAACTTTGGATGTTGCTGTTCCCATTGAGGAAGGCATGGAGAAGATCGCTTTAGTGGGTTCCTCTCTTTCAGTTGAGGAGAACGGCAATAAGAGTGATAGTGAAATTGAAATTGAAAGCGAGAGTGAGAGTGAGAGTGGAAGTGAAAATTCTGAGTCTGAGAGTCCTTCTGATTCTGGTAGCGGAAGTAGCAGCAGCAGCAGCAGTGATAGCGAGGATGAGGATGAGGATGATGATGATGACGTGGAAATTGAAGAAGGCGAGATAAGTGGTTCTGATGAAGAGGAAACGGTTAGTTGGAGCATGGTTGGTGAGGATATTGATCATGAAGATGAAGATGGTGATGTGGGAGTAGGACCCATCAAGTCAAAGAACGAGCTTCAGAATCTGCCTCCTGTTCCTCCAGTTGATGCGACTTTGGAACCACACCATCAAGTGTTGCCAGTGGGAATTGTTATGTCGATTCTTGGTGCTCAAGTCATCGTGGAAGGAGTGGAGAAGCATGACCCTCTTAATGAGGGTTCTATTCTTTGGTTGACTGAAATCCGAAAACCACTAGGTTTAATTGATGAAATTTTTGGACCAGTCAAGAACCCTTATTATGTTGTTAGATACAATTCTGAAAGTGAAGTCCCCACAGGGATCCTCGAGGGAACCCTGATCTCATTTGTTCCAGAATTTGCTGATCACATCCTTAATAACAAGGATCTGTATAGGAAAGGGTACGATGCATCTGGTGCAAATGATGAAGAGCTGTCTGATGAAATGGAGTTTTCAGATGATGAGAAAGAGGCTGAATACAGGAGAATGCAAAAAACGACAAAGAGAGGTGCAAACGATCAAAAAAATCATGGCAAGAAAAAAAACAACAGAAATAAATTTTCACCGAAAGAGCATGCGGCACCTACCAACCCTGCTGCACCTGCTGCACCATTGCTTAATCATGGAAATTGTCCTCCTTTTTCAGGCATTGGACAAGGTCTTCCAGGGGGAACTACCACAGTTCAATCATTTCCACACTTAAACACAGCGCCTAACTTTACTATAAACGGAGTTTGGCCAAATGGAACATCATTTCCACAGCAGCAACAGCCTCCCATGCTTCCAAATGGATTTCCCACAAACGGCATGTCATGGTACCCACAAAATACTCAAATTTCTCCTCAGATGCCAATGCAAGGAATTCCATTTCAGCAGCAATTACATCCCAATCAGGGATCTCTTCCCACAGCTATGCTTCCTGGGATGCAGCCCAACATGTTTGGTCAATCCATGTATGCAGCAGGGCTTGTTGCTCAAAACCAAATGGCATTTGGGATGGGCTCACCCTTCCCACAGATGCAGCCACCACCTATTTCTGCTCCACAACAGGGTTTTCCATCATCCATTGAGTTTCAGTCAGAAAGAAACCTTAATTTGCATTCTAATACTGTTTCTGGTGCCCCCGTTCAGTTTCATCCACGTCCAAATGCTAATCGTGGGAGAAAAACATTTCATGGTGCAGCTAGGAAAGGGTGGCGACCACCCCAGTGA 1680 0.4488 MTSQHENGSNIDPNHIEVETAMVSQLENGSKIDPNPIRVETQEAEAEKFGTLDVAVPIEEGMEKIALVGSSLSVEENGNKSDSEIEIESESESESGSENSESESPSDSGSGSSSSSSSDSEDEDEDDDDDVEIEEGEISGSDEEETVSWSMVGEDIDHEDEDGDVGVGPIKSKNELQNLPPVPPVDATLEPHHQVLPVGIVMSILGAQVIVEGVEKHDPLNEGSILWLTEIRKPLGLIDEIFGPVKNPYYVVRYNSESEVPTGILEGTLISFVPEFADHILNNKDLYRKGYDASGANDEELSDEMEFSDDEKEAEYRRMQKTTKRGANDQKNHGKKKNNRNKFSPKEHAAPTNPAAPAAPLLNHGNCPPFSGIGQGLPGGTTTVQSFPHLNTAPNFTINGVWPNGTSFPQQQQPPMLPNGFPTNGMSWYPQNTQISPQMPMQGIPFQQQLHPNQGSLPTAMLPGMQPNMFGQSMYAAGLVAQNQMAFGMGSPFPQMQPPPISAPQQGFPSSIEFQSERNLNLHSNTVSGAPVQFHPRPNANRGRKTFHGAARKGWRPPQ 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0817 559 MobiDBLite consensus disorder prediction 376 391 - -
Aed5g0817 559 Gene3D Probable tRNA pseudouridine synthase domain 167 271 IPR038664 -
Aed5g0817 559 MobiDBLite consensus disorder prediction 294 367 - -
Aed5g0817 559 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 6 548 - -
Aed5g0817 559 MobiDBLite consensus disorder prediction 527 559 - -
Aed5g0817 559 MobiDBLite consensus disorder prediction 21 48 - -
Aed5g0817 559 MobiDBLite consensus disorder prediction 68 147 - -
Aed5g0817 559 MobiDBLite consensus disorder prediction 98 117 - -
Aed5g0817 559 Pfam Gar1/Naf1 RNA binding region 196 272 IPR007504 GO:0001522|GO:0042254
Aed5g0817 559 SUPERFAMILY Translation proteins 197 258 IPR009000 -
Aed5g0817 559 MobiDBLite consensus disorder prediction 372 391 - -
Aed5g0817 559 MobiDBLite consensus disorder prediction 311 334 - -
Aed5g0817 559 MobiDBLite consensus disorder prediction 118 142 - -
Aed5g0817 559 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 6 548 IPR040309 GO:0000493|GO:0003723|GO:0005732|GO:0042254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0817 K14763 - gmx:102660668 770
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0817 5 6142968 6145886 Aed5g0817 5 6142968 6145886 ECH