Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0784 ATGTTTAGGTTTTCTTGTTTCCATGCTAATGTCCAAGGTAACAAGGCAAAGAAAACAGTTCAACCTTCTACTGAAACAATGGTGAAGGGTTTGCAAGATGTTACGCGAAATCATGGTCGTAAAGATTCATCTAATCCTCCAAGAACATATTCATCATCCCTTCCGAAAGAACAAACACACAAGCAAATAAATGTTGTTGAGAATCATAATAGCAATAGGGATTCAGTTGAGCGCAGTTGCAGGTCAGAGGATCTGAATAGCAAGTTTTCCTTTGAAAATGACAGCAATGTTCACCAAACTAGGCATTTTAAGAAGAGCCAGTCTCTTCAAGATGGGCTTGACCAAGTAGTAAGGGATGGTGATGAAGATCTGGGGTTGTCTTGTGATGGTGGCAAAAGCCAGGATGAGTCCCCGGTGTCTATTACCAGAAAGTATCCTGATGCAAACCCCATTGATCAGTGTGGAAATAGTCCAAACGTCGAGTTTCAAGTCAGTTCAGGTCTTGCAAATGATGGCTCACTTTTTTCAACAGGGGACCCAACACCTTCAGATAAAGATGCACATGAAATTTCTGATACTCCGTTATCTGGTGAATTTGCTGGTGACATTCCTGACCAGACTTATGTTCCTGGTACCTTATCTCTGAGGAAGTCACGTTCTTTACCCAATATCAGGGCTTCTATTCTTACTTATGAAAAAGATGCTTTTAAATGTCCATGGTCATTGTCAAGATCTTCGGATGATCTTCATGCTTTACGCATGAGGCAGAAAGAGGAATTCATCAATGAGTTTCATGATCAAATAAGGGGAGATCAAGAAAGAGAGAATGACATGGGAAAGCCTGAAGATGGTCATATGGACAATTTCTTTGATGATGGTTTTGATTCTTATCTGCTTTCTGCTTCAGCAAAAGACTGGGTAATGCCAATTACAGATGATACAAGTGATATCAAAACCCATCAAAGAGATTCCTCAGTTGACTGTGCAGGTGAATTTCCTAAGAAGGATTTTAAGATTAAGCGCATTGAGGATTGGGTAATTGGTTTGCAGCATTGTGGACCACCTCTAGAGGAAACAAATGAAGATTTGCCTGAAGTTATTAAACCTTTAGTTGATGTTAACACGGTAAATGGCGCGACTGCTGCCAGTGTGGATCATAAGGTCACTCCAGAAATGGAAGCAGCTAAAATATATATATCTTCTCTGAGTGCTAATGCCACTGCTGCTCAGCTGGGAAATCATGGGTTGGTTGTGATCCCCTTTTTGAGTGCATTTGTGAGTTTAAAAGTGCTCAATTTGGCTGGAAATGCTATTGTGAGGATAACTGCTGGTGCTCTTCCTCGTGGACTTCACGCGTTGAATTTATCTAGAAACAAGATCTCCACTATAGAAGGATTACGCGAACTTACTCGGCTTCGTGTCCTAGACCTCAGTTACAACCGTATATTAAGAATTGGACATGGCCTTGCATCCTGCTCATCTTTGAAGGAGCTCTACCTGGCTGGAAACAAGATCAGTGAAGTAGAGGGTCTGCACCGCCTCTTGAAACTAAGTATCCTGGATCTCCGTTTTAACAAAATTTCAACAGCCAAATGTTTAGGCCAACTTGCAGCCAACTATAATACTTTGCAAGCTATCAACTTGGATGGGAACCCAGCCCAGAAAAATGTTGGAGATGAACAGATGAAGAAATATCTGCAAGGCCTTCTTCCCCATCTTGTCTACTACAATCGGCAGCCTATGAAAGTGAGCACTTTGAAGGATGGAGCAGAACGTTCGGTTCGGTTAGGAATGAATTCCCATCAGTTTGATCGTGGCCTTAGAGCGGATCGCAAGGCCACAAGGAAGGGCAGCCAAGGTGTTGCAGCCACACGGAGGCCATCAATTGCTTCTACTAATGTTCGCAGAAGTGGGGACTCACCAAAACTGTCCAAGGGCAAGCAAGCTCTCCTGCCACCAACTAGAACCAAAGTATCAACCCAAAGTCGCCATCATTTTGATGCTCCCACTAAAGTATTGAACTTGGTGCCAGAGAGCTCCATGCGCAAGAGTCGCAGTGAGGGAAATTTTGGAGTTCTATGA 2082 0.428 MFRFSCFHANVQGNKAKKTVQPSTETMVKGLQDVTRNHGRKDSSNPPRTYSSSLPKEQTHKQINVVENHNSNRDSVERSCRSEDLNSKFSFENDSNVHQTRHFKKSQSLQDGLDQVVRDGDEDLGLSCDGGKSQDESPVSITRKYPDANPIDQCGNSPNVEFQVSSGLANDGSLFSTGDPTPSDKDAHEISDTPLSGEFAGDIPDQTYVPGTLSLRKSRSLPNIRASILTYEKDAFKCPWSLSRSSDDLHALRMRQKEEFINEFHDQIRGDQERENDMGKPEDGHMDNFFDDGFDSYLLSASAKDWVMPITDDTSDIKTHQRDSSVDCAGEFPKKDFKIKRIEDWVIGLQHCGPPLEETNEDLPEVIKPLVDVNTVNGATAASVDHKVTPEMEAAKIYISSLSANATAAQLGNHGLVVIPFLSAFVSLKVLNLAGNAIVRITAGALPRGLHALNLSRNKISTIEGLRELTRLRVLDLSYNRILRIGHGLASCSSLKELYLAGNKISEVEGLHRLLKLSILDLRFNKISTAKCLGQLAANYNTLQAINLDGNPAQKNVGDEQMKKYLQGLLPHLVYYNRQPMKVSTLKDGAERSVRLGMNSHQFDRGLRADRKATRKGSQGVAATRRPSIASTNVRRSGDSPKLSKGKQALLPPTRTKVSTQSRHHFDAPTKVLNLVPESSMRKSRSEGNFGVL 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0784 693 PANTHER BNAA09G01440D PROTEIN 75 691 - -
Aed5g0784 693 ProSiteProfiles Leucine-rich repeat profile. 471 493 IPR001611 GO:0005515
Aed5g0784 693 MobiDBLite consensus disorder prediction 605 666 - -
Aed5g0784 693 SMART LRR_typ_2 469 492 IPR003591 -
Aed5g0784 693 SMART LRR_typ_2 514 536 IPR003591 -
Aed5g0784 693 SMART LRR_typ_2 425 448 IPR003591 -
Aed5g0784 693 Gene3D Ribonuclease Inhibitor 374 565 IPR032675 -
Aed5g0784 693 ProSiteProfiles Leucine-rich repeat profile. 449 470 IPR001611 GO:0005515
Aed5g0784 693 MobiDBLite consensus disorder prediction 34 59 - -
Aed5g0784 693 MobiDBLite consensus disorder prediction 115 129 - -
Aed5g0784 693 PANTHER NISCHARIN RELATED 75 691 - -
Aed5g0784 693 MobiDBLite consensus disorder prediction 44 59 - -
Aed5g0784 693 ProSiteProfiles Leucine-rich repeat profile. 494 515 IPR001611 GO:0005515
Aed5g0784 693 SMART LRR_sd22_2 492 513 - -
Aed5g0784 693 SMART LRR_sd22_2 469 491 - -
Aed5g0784 693 SMART LRR_sd22_2 447 468 - -
Aed5g0784 693 SMART LRR_sd22_2 514 538 - -
Aed5g0784 693 Pfam Leucine rich repeat 427 482 IPR001611 GO:0005515
Aed5g0784 693 MobiDBLite consensus disorder prediction 624 639 - -
Aed5g0784 693 SUPERFAMILY Outer arm dynein light chain 1 419 580 - -
Aed5g0784 693 MobiDBLite consensus disorder prediction 91 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0784 Aed-Chr5 5905650 5911103 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0784 - - gmx:100790061 1207.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0784 5 5905650 5911103 Aed5g0784 5 5905650 5911103 ECH