Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0771 ATGGAAGCTTGCTACTGCAACCTTGAAGTGGATGTTAATGGAGAAGAGACTTTCATGGTGGACAAGACTGTTATTACTCAGTATTCAAACAAATTTGCTAGACTATTTGGAAAGACTAGTGGTGCCACAGGAAAGCTTAAAGTAATATTCCATGATTTTCCAGGAGGTGCTGAAGGCTTTGAGCTCATGTTAAAATTCTGTTACAACAATGGAACAGCTGATATAAGTCCTTCCAATTTGTTTATGGCGCGTTGTGCCGCCGAGTACATGGAAATGAAGGAACCTGTGTCTGATGTTTCTAACTTGTTGGAGCAAACTGAAAAGTCACTCCAAGAGATTAGCTATTGGACTTGGTCAGATCTTTTGATTGGTTTGAAACAGTGCCAGAGTTTACTAGTTCCAGATTCTTCTGTGATGGTTGAGAGATGCTTGGACACTATTGTGGGGAGGCTTGTTTTGGCTAATGAAGCAAGCCCTTGTCCTTCAACTAGTTCCACAGACAGTTCTTGGATTCGGTTTTCATGTGACTCTAAGAGCACTGAGAGTGTAAAGACTAGTTTCTCTCGTTTAACTTGGTGGTTTGAAGATCTACTATTTTTGAGTCCCTTGTTGGTTACAATGTTGGTTAAGTCGATGCTTTCGCGAAAGATGGACCATGTTGTGATCAGCAAGTTTCTTGTCTACTATCAAAAGACCAAATTTTTCACTGCTACTACACATGAGAAGTGCAGGATCATAGAAATGGTCATAGGTATGCATTATGATATGGATCTAAGTTGTGTTCCTTGCAAGACTTTGTTTGGGATTCTGAGGGTTACTTTGGGTTTGAACATAAGCAAATGTAGCAGGAATAAGTTGGAGACTATGATTGGTTCCCAATTGGATCAAGCAACCTTGGACAATTTGCTTGTTCCTTCTCCTTATGGAACAAACTACTTATATGATGTGAACCTTGTTTTGAGATTTTTGAAGGCATTCTTGCGGCGAGGGAATGATCTAGTCACTCTCATTCGGATGAGGAAAGTTGCTAGCTTGATAGATTTGTATATAGCAGAAATAGCCCCTGATCCTTGTTTGAAAACTTCAAAGTTCTTGGCTCTTGCCACAGCAATTCCAGATTCTGCACGAGATTCTTATGATGAGCTCTACCATGCAATGGACATGTATCTTGAGGTACACAGTCAATTGTCCCAGGAAGAAAGACTGAAGATATGCTGTGGTTTAAATTATGAGAAGCTTTCACCTCAAGCTTGCCTACACCTTTCTCAGAACAAAAAATTTCCTTCAAAATCCACAGTTCAGACTCTTATCTCTCAACAATCTAAGCTCAAAAATTTACTCCATGTCACTCCCAGTACAAGTTCATACATTGAATCACCTTGTAGCAGCTCCAGTGGTGGTGGTGCTGCTCAAAAGGGAAAGAAAGACAAAACCAGTGAACAAGTTGTGTTGTATTCTGGCAATTTTGATCTTTCTACAGATAATGAGAAACTGAAAGCACATTTACAAGGAATGCAGTGGAGGGTCATGGAATTAGAGAAATTCTGTAGGAAAATGCAAGTCCAAATGGCAAAGATCACAAAATCAAAAGCCTCTGGCGGCAATAGTTATGCCAAATCTTTGCCCAAGCTATGCTCATGA 1641 0.4004 MEACYCNLEVDVNGEETFMVDKTVITQYSNKFARLFGKTSGATGKLKVIFHDFPGGAEGFELMLKFCYNNGTADISPSNLFMARCAAEYMEMKEPVSDVSNLLEQTEKSLQEISYWTWSDLLIGLKQCQSLLVPDSSVMVERCLDTIVGRLVLANEASPCPSTSSTDSSWIRFSCDSKSTESVKTSFSRLTWWFEDLLFLSPLLVTMLVKSMLSRKMDHVVISKFLVYYQKTKFFTATTHEKCRIIEMVIGMHYDMDLSCVPCKTLFGILRVTLGLNISKCSRNKLETMIGSQLDQATLDNLLVPSPYGTNYLYDVNLVLRFLKAFLRRGNDLVTLIRMRKVASLIDLYIAEIAPDPCLKTSKFLALATAIPDSARDSYDELYHAMDMYLEVHSQLSQEERLKICCGLNYEKLSPQACLHLSQNKKFPSKSTVQTLISQQSKLKNLLHVTPSTSSYIESPCSSSSGGGAAQKGKKDKTSEQVVLYSGNFDLSTDNEKLKAHLQGMQWRVMELEKFCRKMQVQMAKITKSKASGGNSYAKSLPKLCS 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0771 546 MobiDBLite consensus disorder prediction 457 477 - -
Aed5g0771 546 SUPERFAMILY POZ domain 4 103 IPR011333 -
Aed5g0771 546 Pfam NPH3 family 191 418 IPR027356 -
Aed5g0771 546 ProSiteProfiles NPH3 domain profile. 191 442 IPR027356 -
Aed5g0771 546 SMART BTB_4 6 107 IPR000210 GO:0005515
Aed5g0771 546 Gene3D Potassium Channel Kv1.1; Chain A 2 117 IPR011333 -
Aed5g0771 546 ProSiteProfiles BTB domain profile. 6 70 IPR000210 GO:0005515
Aed5g0771 546 Pfam BTB/POZ domain 4 105 IPR000210 GO:0005515
Aed5g0771 546 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 12 546 - -
Aed5g0771 546 PANTHER OS12G0117600 PROTEIN 12 546 IPR043454 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0771 Aed-Chr5 5788615 5792539 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0771 4 525 EF-hand Containing Proteins AT3G44820 26.838 2.79e-53 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0771 - - gmx:100784792 980.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0771 5 5788615 5792539 Aed5g0771 5 5788615 5792539 ECH