Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0748 ATGTCCCAGCTTGGTCGGAAACTCAGCCACTCCACCACCATCCGGCGAAGGTTCCACCACCGCGTTTCCATGCTCCGTCGGTGCCTCCTCCGAGTCCTCCACCGCATCCTCCTCTGCTCCGGGAGCAAGGCCACCGGTTCCACGTACAGCATGCTGCCAGCAGCATTGCCGTCTCCGCCGCCGCCGCCGGGATCCTCCGGCGAGGCTGGCCGTGAAGAGATGGACCTTTCTACGTCGGCGCTGTTTCAAACACATGATTTCGACTCTGATTTGGTTTCCTTGAAGATCAGCTTGTTGGGGGATAGCCAAATTGGAAAAACCAGCTTTTTGGTGAAATATGTTGGAGATGAAAAAGAGAAGCAAGGGAACCAGAGAGAAGGGTCAAATCAAATGGATAAAACTTTGGTTGTTGAAGGGGCACGTATATCGTATCGTATCTGGGAAGTACAAGGTGATGGAAAATCAGAAGATCAACTCCCAAAGGCATGTACGGACTCCGTGGCAATTTTGATTATGTTTGATCTAACAAGTCGATGCACATTAAACAGTGTCGTTGGATGGTACAAAGAAGCCAGGAAATGGAATCAGACAGCAATCCCAGTGTTGATAGGAACCAAATTTGATGATTTCATTCAGCTCCCTATTGATTTGCAATGGACCATCGCCAATGAGGCAAGAACATATGCAAAGGCCCTCAATGCCACCTTGTTCTTCTCAAGTGCAACCTACAACATCAATGTGAATAAGATCTTCAAGTTCATCACTGCTAAACTATTCGACCTACCATGGGCAATGGAGAGGAATCTAACTGTTGGGGAACCCATCATTGACTTCTAA 837 0.4839 MSQLGRKLSHSTTIRRRFHHRVSMLRRCLLRVLHRILLCSGSKATGSTYSMLPAALPSPPPPPGSSGEAGREEMDLSTSALFQTHDFDSDLVSLKISLLGDSQIGKTSFLVKYVGDEKEKQGNQREGSNQMDKTLVVEGARISYRIWEVQGDGKSEDQLPKACTDSVAILIMFDLTSRCTLNSVVGWYKEARKWNQTAIPVLIGTKFDDFIQLPIDLQWTIANEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLPWAMERNLTVGEPIIDF 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0748 278 PRINTS Transforming protein P21 ras signature 135 157 - -
Aed5g0748 278 PRINTS Transforming protein P21 ras signature 196 209 - -
Aed5g0748 278 PRINTS Transforming protein P21 ras signature 94 115 - -
Aed5g0748 278 PRINTS Transforming protein P21 ras signature 236 258 - -
Aed5g0748 278 ProSiteProfiles small GTPase Rab1 family profile. 88 278 - -
Aed5g0748 278 PANTHER - 42 277 - -
Aed5g0748 278 MobiDBLite consensus disorder prediction 52 74 - -
Aed5g0748 278 SMART rab_sub_5 94 261 - -
Aed5g0748 278 PANTHER MONOMERIC G-PROTEIN 42 277 - -
Aed5g0748 278 SMART rho_sub_3 96 260 IPR001806 GO:0003924|GO:0005525
Aed5g0748 278 Pfam Ras family 95 258 IPR001806 GO:0003924|GO:0005525
Aed5g0748 278 Gene3D - 86 269 IPR027417 -
Aed5g0748 278 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 94 270 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0748 Aed-Chr5 5587269 5591216 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0748 K07976 - gmx:100780638 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0748 5 5587269 5591216 Aed5g0748 5 5587269 5591216 ECH