Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0743 ATGTCGTGGCTCCTCCGATCAACCAAGTCTAAGCTCCTCTCTTCCTCTTCTTCACTTTCCAGAACCTTCCCCTCTCTCTCCCGTCCCCATGACCTTCCTCAGATCGGAGCAATCTCTCCCCTCCCCGATCTCTTCACCCGCAACACTGCCACCATGCCTTTTGCGAAGGAAAACACTTCCGGTGGAAACTTGATCGGTCTTCCCGGAGTTCCTGCGAATAAGCTTGGCAGTGATCCTAATGCGATCAAGTCTCCGAGGTACAAAGCTTCTGGACTGGACATCAATGTGCTTGCTGGAGCTAGATATGTCTCTAGAGTTTGGGCTGCACAAGGTCCAATGCTATTGGGAGTCAATACTGTGATGGCTAGAAGTATGGAAGCTGGCACATTGGGAATGGCTGGTCATAAACGTTTTATGAGTGACATCCCAAGTAAAACCAGTGAGACAAACCCATCTGGTTTTCGTCCGTTATCTCCTCATCTTCCTCTTTATCAACCCCAACTTTCTTCGACTCTCTCAATTTTCAATAGAATTGCTGGAGCTGTCCTAGCCGGTGTCATTTTGCTTTTTTATATGATCTATATGAAATTGGGTTTGGTTAGCCTCACCTATGACTCTTTCTACCAGTTCCTATTTTATTCATCAAAACTCAACCTACTTGTCGTGGAGATTTCTGCCTTAGCCGTGTCCTATCATCTGTATAGTGCAATTCGTCATTTATTCTTATGA 729 0.4582 MSWLLRSTKSKLLSSSSSLSRTFPSLSRPHDLPQIGAISPLPDLFTRNTATMPFAKENTSGGNLIGLPGVPANKLGSDPNAIKSPRYKASGLDINVLAGARYVSRVWAAQGPMLLGVNTVMARSMEAGTLGMAGHKRFMSDIPSKTSETNPSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAVLAGVILLFYMIYMKLGLVSLTYDSFYQFLFYSSKLNLLVVEISALAVSYHLYSAIRHLFL 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0743 242 PANTHER SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT 88 241 IPR014314 GO:0000104|GO:0006099|GO:0009055|GO:0045281
Aed5g0743 242 PANTHER SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT, MITOCHONDRIAL 88 241 - -
Aed5g0743 242 Pfam Succinate dehydrogenase/Fumarate reductase transmembrane subunit 155 242 IPR000701 GO:0016627
Aed5g0743 242 CDD SQR_TypeC_SdhC 155 242 - -
Aed5g0743 242 Gene3D Fumarate reductase/succinate dehydrogenase, transmembrane subunit 140 242 IPR034804 GO:0016020
Aed5g0743 242 SUPERFAMILY Fumarate reductase respiratory complex transmembrane subunits 148 241 IPR034804 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0743 Aed-Chr5 5539581 5542371 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0743 K00236 K03885 gmx:100499683 384.8