Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0741 ATGGCAGAACCCAAAGTTAAATACGATCGCCAACTCAGAATATGGGGTGAACAAGGACAGGCAGCCCTTGAGAAATCTAGTATTTGCTTACTTAACTGTGGTCCTACCGGTTCTGAAACACTTAAGAATCTTGTTCTTGGTGGGATTGGAAGCATCACTGTAGTTGATGGATCTAAAGTCGAAGCGGGTGACCTTGGAAACAATTTTTTGGGTACAGTGACTTCTTGTTGTACACGGGTTATGTGCTTAGGAATCTATTTTGGTTCTCATTTTTGTCCCTTATTTGTAGTGGATGAAGCAAGCCTTGGGAAGTCAAAGGCAAAATGTGTATGCTCATTTCTTCAAGAGCTGAATGATGCAGTTAAAGCAAAATTTGTAGAAGAGTCTCCAGAAACATTGATTGAAACAAATCCATCATTTTTTTCTCAATTTACGTTGGTTATTGCCACTCAGCTCGTCGAAAATTCAATGATAAAGCTTGACCGAATCTGCAGGGCGGCAAATGTTATGTTGATCTTTGCTCGCTCCTATGGCCTTACAGGGTTTGTTCGAATTAGTGTGAAGGAACATGCTGTGATTGAGTCAAAGCCTGAACATTTTTTGGATGATCTCCGGTTAAATAATCCTTGGCCTGAACTCAAGAGATTTTCCGATGACATTGACTTGAATGTGCAAGATCCTGTGGTTCATAAACACATACCATATGTTGTCATTCTTGTCAAGATGGCTGATGAGTGGGCCAAAAGCCATGGCAGTAGGCTTCCATCAACCAGAGAAGAAAAAGGAGTTCAAGGTTTGAGATTCTTAAGGCTGGGATGGTTGCACAGGATGAAGATAATTATAAAGAAGCTATTGATTCAGCATTCAAAGTATTTGCTCCCCCGAGGAATAAATTTGGAGTTGCAACAGATACTAAATGATAGTTCTGCTGAAGTGGACTCTAATTCTTCAGATTTTTGGGTGTTGGTGGCAGCTCTGAAGGATTTCATTGCAAATGAAGGTGGTGGGGAGGCACCTCTTGAAGGATCTATACCAGATATGACTTCTTCTACTGAGCAATATGTAAATTTGCAGAATATTTATTACGCTAAAGCTGAGGCTGACTTTCTTGTAATAGAACGTCTAGTGAGGAGTACTTTGAAGAAGATTGGTAGAGATTCAAATAGCATCCCGAAGTCAATGATTAAGAGCTTCTGTAAAAATGCAAGAAAACTCAAAGTTTGCAGGTACCGTCTAATTGAAGATGAGTTTAATTCTCCAAACCTACCCGAGTTACAGAAGTACCTAACTGATGAGGATTACAGCATTGCTGTGGGAATTTATATTTTGCTTCGTGCTGTTGACCGGTTTGCTGCTAATTACAACAGCTTTCCAGGACAGTTTGACAGTGCAATGGATGAGGATATACCTCGATTGAAGAGCACAGCAATTGGCTTACTTAATGACTTGGGATGCAATGGAGCCACTTTGGCTGAGGACCTTATCAATGAGATGTGCCGATTTGGTGCAGCAGAGCTTCATGCTGTTGCTGCATTGGTTGGAGGAATTGCATCGCAAGAAGTGATCAAGCTCATAACAAGGCAATTTGTACCAATGTCCGCAACCTACATATTCAACGGCATTGGCCACAAGTCACAGCTGTTGTCACTGTAA 1653 0.4108 MAEPKVKYDRQLRIWGEQGQAALEKSSICLLNCGPTGSETLKNLVLGGIGSITVVDGSKVEAGDLGNNFLGTVTSCCTRVMCLGIYFGSHFCPLFVVDEASLGKSKAKCVCSFLQELNDAVKAKFVEESPETLIETNPSFFSQFTLVIATQLVENSMIKLDRICRAANVMLIFARSYGLTGFVRISVKEHAVIESKPEHFLDDLRLNNPWPELKRFSDDIDLNVQDPVVHKHIPYVVILVKMADEWAKSHGSRLPSTREEKGVQGLRFLRLGWLHRMKIIIKKLLIQHSKYLLPRGINLELQQILNDSSAEVDSNSSDFWVLVAALKDFIANEGGGEAPLEGSIPDMTSSTEQYVNLQNIYYAKAEADFLVIERLVRSTLKKIGRDSNSIPKSMIKSFCKNARKLKVCRYRLIEDEFNSPNLPELQKYLTDEDYSIAVGIYILLRAVDRFAANYNSFPGQFDSAMDEDIPRLKSTAIGLLNDLGCNGATLAEDLINEMCRFGAAELHAVAALVGGIASQEVIKLITRQFVPMSATYIFNGIGHKSQLLSL 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0741 550 Pfam ThiF family 8 72 IPR000594 -
Aed5g0741 550 Gene3D - 378 550 - -
Aed5g0741 550 Pfam ThiF family 95 529 IPR000594 -
Aed5g0741 550 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 95 549 IPR045886 -
Aed5g0741 550 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 2 70 IPR045886 -
Aed5g0741 550 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 7 71 IPR035985 GO:0008641
Aed5g0741 550 CDD APPBP1_RUB 7 548 - -
Aed5g0741 550 Gene3D - 2 292 - -
Aed5g0741 550 PANTHER NEDD8-ACTIVATING ENZYME E1 REGULATORY SUBUNIT 95 549 - -
Aed5g0741 550 PANTHER NEDD8-ACTIVATING ENZYME E1 REGULATORY SUBUNIT 2 70 - -
Aed5g0741 550 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 95 546 IPR035985 GO:0008641
Aed5g0741 550 PIRSF APP-BP1 1 82 IPR030667 GO:0019781|GO:0045116
Aed5g0741 550 PIRSF APP-BP1 88 550 IPR030667 GO:0019781|GO:0045116
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0741 Aed-Chr5 5519979 5528430 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0741 8 183 EF-hand Containing Proteins AT2G30110 25.843 5.79e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0741 K04532 - gmx:100777973 919.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0741 5 5519979 5528430 Aed5g0741 5 5519979 5528430 ECH