Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0733 ATGGGTTACTCCATAAGAGTGTGTTGTGTCTTATTTTTGGTAGTGTTGTTGGTGGCATGTGCTAGAGGGGAGGACCCTTATAGGTTCTACACATGGAATGTCACATATGGAGACATTTATCCACTTGGTGTTAAACAACAGGGTATTTTGATAAACTGGCAATTCCCAGGGCCACAAATTGAGGCTGTGACCAATGATAACTTGATTATCAATGTTTACAACAGCTTGGATGAACCTTTCCTCTTATCTTGGAATGGAGTGCTGCAGAGGAGAAACTCATGGCAGGATGGAGTGTATGGTACCAATTGTCCAATTCAACCAGGGCATAATTTCACTTATGTTCTTCAAGATCAAATAGGTAGCTACTTCTACTACCCTTCCCTTTCTTTCCACAAGGCAGCAGGAGGTTATGGTGGATTCAAAATTGCGAGCCGCCCTGGGATTCCGGTGCCTTTTCCTTCTCCAGCCGGAGATTTCACCATATTGGCAGGAGACTGCAGAATGGATGGAGGACAATGGACACAAGCAAGCAGGCTAAATTACAATTTAAGAGATACAGTTTCTCGTTCCACAGTTCAGGTGTATCCGAAGGCATGGACTGCAATTTACATGCCTCTGGACAATGTGGGAATGTGGAATGTAAGGTCTGAGAATTGGGTTCGTCAGTACTTGGGGCAGCAATTTTATCTTAGAGTCTATTCCCCTGCAAATTCATGGAGAGATGAGTACCCAATTCCAAGTAATGCTCCACGCTGTGGCAAGGCTGTGGGCCACTACTAA 780 0.4449 MGYSIRVCCVLFLVVLLVACARGEDPYRFYTWNVTYGDIYPLGVKQQGILINWQFPGPQIEAVTNDNLIINVYNSLDEPFLLSWNGVLQRRNSWQDGVYGTNCPIQPGHNFTYVLQDQIGSYFYYPSLSFHKAAGGYGGFKIASRPGIPVPFPSPAGDFTILAGDCRMDGGQWTQASRLNYNLRDTVSRSTVQVYPKAWTAIYMPLDNVGMWNVRSENWVRQYLGQQFYLRVYSPANSWRDEYPIPSNAPRCGKAVGHY 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0733 259 Gene3D - 145 257 IPR008972 -
Aed5g0733 259 Pfam Multicopper oxidase 167 234 IPR011706 GO:0005507|GO:0016491
Aed5g0733 259 PANTHER L-ASCORBATE OXIDASE HOMOLOG 8 166 - -
Aed5g0733 259 PANTHER L-ASCORBATE OXIDASE HOMOLOG 168 255 - -
Aed5g0733 259 Gene3D - 27 144 IPR008972 -
Aed5g0733 259 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Aed5g0733 259 PANTHER MULTI-COPPER OXIDASE 8 166 IPR045087 -
Aed5g0733 259 PANTHER MULTI-COPPER OXIDASE 168 255 IPR045087 -
Aed5g0733 259 Pfam Multicopper oxidase 34 145 IPR011707 GO:0005507
Aed5g0733 259 SUPERFAMILY Cupredoxins 168 255 IPR008972 -
Aed5g0733 259 SUPERFAMILY Cupredoxins 24 166 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0733 Aed-Chr5 5460483 5465074 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0733 - - gmx:100797670 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0733 5 5460483 5465074 Aed5g0733 5 5460483 5465074 ECH