Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0724 ATGGCTTATTGGCTTTTGTTGCTGATCTTTATAGTGAATTTTCTGAGCAGTGTGCAAGAGTTTCCAGCAGTGGATTTGTTTGTGACAACAGCAGATCCTGAGCTTGAACCACCGATTATCACAGTGAACACTGTGTTGTCTTTGCTGGCACTTGATTACCCACCTCAGAAGCTAGCTTGTTATGTTTCTGATGATGGTTGTTCTCCTCTTACCTTCTATGCTCTTCAGGAAGCTTCTAAATTTGCATTGTTTTGGGTACCTTTCTGTAAGAAGTACGAGGTTCAAGTTAGAGCTCCATTCAGATACTTCTCTGACAAACATGAGGTTTCCACCGCCAACAACGCACCAGAATTCAAACAAGAATGGTTACAAATGAAGGATATGTATGATAATTTTAGCAGCAAAATAGAATTGGATGCATTCAGAAAATCAAATCCATGCCATGGAGATGAGTTTGCGGCTTTCTCAAACACTGAGAGGACAAATTATCCATCCATAATCCAGGTTATATGGGAGAACAAGGAACACCTTGCAGATGAATTGCCGCATTTGATTTACATATCTAGAGAGAAGAGGCCAAAACAGCCTCATCATTACAAAGCCGGTGCCATGAACGTGTTGACAAGAGTCTCCGGATTGATAACCAATGCTCCCTTTATGCTGAACGTGGATTGTGACATGATTGTAAATAATCCAAAGGTTGTTCACCATACGTTGAGCATTTTGCTTGATCCCAAAGGAGAAAAAGAAGTTGCATTTGTTCAATTTCCCCTACAATTCTATGCTACTTTGAACGATGATCCTTTTGGAAATCAGATGACAATTTTGTTTAAGTACTTGACGAGTGGATTAGCTGGACTCCAAGGACCTTTCTATGGAGGAACAAACTGCTTTCATAGAAGAAAAGTTATTTATGGTCTTTCTCCTGATAATGTTGAAAAGGGAAACAGCATATCAGAGGAGGAATTAAAACAAAAATTCGGATCTTCAAAGGAGATTATGAAATCAGCTGCTTGTAATTTGGAAGGGAGAACATATTCGTCTTATGATATTAATATTTCGAACGTTGTTGACATAGCAAGCCAAGTTGCTGGTTATGGATATGAATATGGCACTGGATGGGGAAAACAGGTGGGTTGGATATATGGATCAGTAACAGAAGATGTGCTGACTGGGCTTACAATACATGAAAAAGGTTGGAGGTCAGAATATTGCACGCCGAGTCCAATAGCCTTCACAGCATATATGTGGATTATCAATTGGGGCATGCAACCAGTCTTTGAAGTATGCTATGCATGTCTCCTTGCATATTGCATCATCACCAACTCCAATTTCTTGCCCCAGGACCTAGGAATATGTATTCCCGTTGCTTTTCTCATAATATACAAGATATACACTGTATCAGAATATTTGACAGAAGGGCTATCAATTCGAGCATGGTGGAACAATCAAAGAATGTCAATAATAACAGCCATGAATGCTGGCTTTTGTGCATTTCTTAGCATCCTACTCAAGTTGTTAAGAATATTTGAAACTGTGTTTAACATAACAAAAAAAGAGTTACTCCCAACAGCTAGTAAGGATGTTGGAGATGATGATAAGGATGCTGGAAGGTACACGTTCAATGAGTCCCTAGTTTTCTTGCCAGGCACTACCATGTTGCTGTTGCAATTAACAGCAATGGCTATCAAGTTATTAGGGTTACAACCATCAGTGGCAACTCAAAGTGGTAATGGGTGTGGACTAGGTGAGGTTTTGTGTATATACATGCATGCATGGCTTTTGTTGCTGATCTTTATAGTGAATTTTGTGAGCAGTGTGCAAGAGCTTCCAGCAGTGGATTTGTTTGTGACAACAGCAGACCCTGTGCTTGAACCACCGATTATCACAGTGAACACTGTGTTGTCCTTGTTGGCACTTGATTACCCACCTCAGAAGCTAGCTTGTTATGTTTCTGATGATGGTTGTTCTCCTCTTACCTTCTATGCTCTTCAGGAAGCTTCTAAATTTGCAATGTTTTGGGTACCTTTCTGTAAGAAGTACGAGGTCCAAGTTAGAGCTCCACTCAGATACTTCTCATCAGACATGCCTGAGGCCAATAACAACACACCAGAATTTATACAAGAATGGTTACAAATGAAGGATATGTATGATCAACTTAACCGCAAAATAGACATGGAAGCTTTTAGAAAATCAAATCCATGTCATGAAGAATTTGCGGCTTTCTCAAACACTGAGAGAACAAATCATCCATCCATAATCCAGACAAGAGTCTCAGGGTTGATAACCAACGCTCCCTTTATGTTGAATGTGGATTGTGACATGATTGTAAATAATCCTAAGATTGTTCTCCATGCGTTGAGCATCTTGCTTGATCCCCAAGGAGAAAAAGACGTTGCATTTGTTCAATTTCTCCAACAATTCTATGCTACATTGAAGGACGATCCTTTTGGGAACCAGATGACAATTTTGTTCAAGCACTTGTTGGCTGGATTAGCTGGACTGCAAGGACCTTTCTACGGGGGAACAAATTGCTTCCATAGAAGAAAAGTTATTTATGGTCTTTCTCCGGATAACGTGGAAAAGGGAAACAGCATATCAGAGGAGGAATTAAAACAAAAATTTGGAGCTTCAAAGGAGATTATGAAATCAGCTGCTTATGCTTTGGAAGGAAGAACCTATTCTCCTAATGATATTAATATTTCGAACGTTGTTGAAGTAGCAAGCCAAGTTGCCGGTTGTGAATATGAATATGGCACTGGATGGGGCAAACAGGTTGGTTGGATATATGGATCATTAACAGAAGATGTACTCACCGGGCTATCAATACATGAAAAAGGTTGGAGATCAGAATTGTGTACACCAAGCCCAATTTCCTTCACGGGCTTTGCTCCAGGAGGTGGCCCAGGTGCAATGGCCCAACAAAAAAGATGGGCCACAGGAGTGTTTGAAATCTTCATATCCAAGCATTGTCCTATTATTGGCACCATTTTCCGTAAGCTTACTTTGAGACAGTGCTTAGCATATATGTGGATTATCAATTGGGGTCTAAGACCAGTCTTTGAAGTATGCTATGCATGTCTCCTTGCATATTGCATCATCACCAACTCCAATTTCTTGCCCCAGGACCTAGGGATATGCATTCCTATTGCACTTTTTGTAATTTACAAGATATATACGGTATCAGAATATTTGGCGGCAGGGTTATCAGTTCGAGCATGGTGGAACAATCAAAGGATGTCAAGAATAACAGCCATGAATGCTGGTTTTTGTGCATTTCTTACTGTCCTACTCAAGTTGTTAAGAATATCTGAAACTGTATTCGACATAACAAAAAAAGAGTTACCCTCAATTGGGGATGTTGTAGATGATGATAAGGATGCTGGAAGGTACACGTTCGATGAGTCCCTAGTTTTCTTGCCAGGCACTACCATTTTGTTGTTACAATTGACAGCAATGGTTATCAAGTTATTAGGGTTACAACCATCAGTGGCAACTCAAAGTGGTAATGGGTGTGGACTAGGTGAGGTTTTGTGTAGTGTTTATTTGATAATTTGCTATTGGCCATTTCTCAGAGGATTGTTTGAGACAGGAAAGTATAGAATTCCCATGTCCACACTATCCAAATCAGCTATCTTAACATGCCTCTTTGTACACCTATGTAGAAGGATCATTGTTGGTTGA 3684 0.3998 MAYWLLLLIFIVNFLSSVQEFPAVDLFVTTADPELEPPIITVNTVLSLLALDYPPQKLACYVSDDGCSPLTFYALQEASKFALFWVPFCKKYEVQVRAPFRYFSDKHEVSTANNAPEFKQEWLQMKDMYDNFSSKIELDAFRKSNPCHGDEFAAFSNTERTNYPSIIQVIWENKEHLADELPHLIYISREKRPKQPHHYKAGAMNVLTRVSGLITNAPFMLNVDCDMIVNNPKVVHHTLSILLDPKGEKEVAFVQFPLQFYATLNDDPFGNQMTILFKYLTSGLAGLQGPFYGGTNCFHRRKVIYGLSPDNVEKGNSISEEELKQKFGSSKEIMKSAACNLEGRTYSSYDINISNVVDIASQVAGYGYEYGTGWGKQVGWIYGSVTEDVLTGLTIHEKGWRSEYCTPSPIAFTAYMWIINWGMQPVFEVCYACLLAYCIITNSNFLPQDLGICIPVAFLIIYKIYTVSEYLTEGLSIRAWWNNQRMSIITAMNAGFCAFLSILLKLLRIFETVFNITKKELLPTASKDVGDDDKDAGRYTFNESLVFLPGTTMLLLQLTAMAIKLLGLQPSVATQSGNGCGLGEVLCIYMHAWLLLLIFIVNFVSSVQELPAVDLFVTTADPVLEPPIITVNTVLSLLALDYPPQKLACYVSDDGCSPLTFYALQEASKFAMFWVPFCKKYEVQVRAPLRYFSSDMPEANNNTPEFIQEWLQMKDMYDQLNRKIDMEAFRKSNPCHEEFAAFSNTERTNHPSIIQTRVSGLITNAPFMLNVDCDMIVNNPKIVLHALSILLDPQGEKDVAFVQFLQQFYATLKDDPFGNQMTILFKHLLAGLAGLQGPFYGGTNCFHRRKVIYGLSPDNVEKGNSISEEELKQKFGASKEIMKSAAYALEGRTYSPNDINISNVVEVASQVAGCEYEYGTGWGKQVGWIYGSLTEDVLTGLSIHEKGWRSELCTPSPISFTGFAPGGGPGAMAQQKRWATGVFEIFISKHCPIIGTIFRKLTLRQCLAYMWIINWGLRPVFEVCYACLLAYCIITNSNFLPQDLGICIPIALFVIYKIYTVSEYLAAGLSVRAWWNNQRMSRITAMNAGFCAFLTVLLKLLRISETVFDITKKELPSIGDVVDDDKDAGRYTFDESLVFLPGTTILLLQLTAMVIKLLGLQPSVATQSGNGCGLGEVLCSVYLIICYWPFLRGLFETGKYRIPMSTLSKSAILTCLFVHLCRRIIVG 1227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0724 1227 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 755 1226 - -
Aed5g0724 1227 PANTHER CELLULOSE SYNTHASE H1-LIKE PROTEIN 755 1226 - -
Aed5g0724 1227 SUPERFAMILY Nucleotide-diphospho-sugar transferases 627 1005 IPR029044 -
Aed5g0724 1227 PANTHER CELLULOSE SYNTHASE H1-LIKE PROTEIN 14 413 - -
Aed5g0724 1227 PANTHER CELLULOSE SYNTHASE H1-LIKE PROTEIN 603 755 - -
Aed5g0724 1227 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 14 413 - -
Aed5g0724 1227 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 603 755 - -
Aed5g0724 1227 PANTHER CELLULOSE SYNTHASE H1-LIKE PROTEIN 413 588 - -
Aed5g0724 1227 Pfam Cellulose synthase 24 315 IPR005150 GO:0016020|GO:0016760|GO:0030244
Aed5g0724 1227 Pfam Cellulose synthase 613 755 IPR005150 GO:0016020|GO:0016760|GO:0030244
Aed5g0724 1227 Pfam Cellulose synthase 414 566 IPR005150 GO:0016020|GO:0016760|GO:0030244
Aed5g0724 1227 Pfam Cellulose synthase 858 1218 IPR005150 GO:0016020|GO:0016760|GO:0030244
Aed5g0724 1227 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 413 588 - -
Aed5g0724 1227 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 153 311 IPR029044 -
Aed5g0724 1227 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 693 856 IPR029044 -
Aed5g0724 1227 SUPERFAMILY Nucleotide-diphospho-sugar transferases 41 413 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0724 Aed-Chr5 5397301 5407936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0724 18 609 Glycosyltransferase AT2G32540 41.515 3.20e-156 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0724 - - gmx:100500469 951.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0724 5 5397301 5407936 Aed5g0724 5 5397301 5407936 ECH