Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0723 ATGGCGGAAACCCTAAGCCCCAATCCCACGATGGGTCAGAAGCAGAGACTCCGCATCCAGTCCCCAACCAGCCCTTTCTTCTTGGGCTCCAACGACGACCAGCTCGAACGCGCCCAGGCACGCGCCGCCCGCGCCGCCGCCATCCGCCGCAAGAGCCTCGCCCCCAGCCAACCTCCTCTTCAGGCCAATTCCGACCCCTGCCTCAACAAGCAGCAGATCCTCGTTTTGTTCCAAAACTGCATCAAACTCGCCAGCGAAAACGCAAGCTGCACTCTTGAGGCTGGAGTCAAAATTTATTCATTAAGGGTGGATTCAGTGCATTCTGAGGCCTATAAAGTTCTTGGTGGGATGAATAGAGCAGGCCAGGCAGCTGAGGAAGACACTACCCTGGATGGTGTTAATATTGAAAGTGGACAAGAAGAAAGCAAGAAAGAAACAAGCAAAAAGTCGTCATTACCTGAGTCAACATTGGAATCATCTTTTGAGGCACTTAATGTAAAGAAGTTTGATGCTGCATTTGTGGTGGATCCTCTCTATCGCCAGACAACAGCAAAATTTGATGAAGGTGGAGCCAAGGGTCTTTTAATGAATAATCTTGGTGTATATGGTGGATGTAGAGTGCTCTTTGATTCACAAGAAGTGCCTGCAAAGTGTATGGCAAGCCAAAATCAATCTGATATTTCAGATACTATTGATATTTCTTTTGTCAGAGATTGTATTGAGCAGATCGTGTTGGACATGTGTGTAAAGGATGAAATTTCTCCAAGTCTCAGGACTATAGTAAACCAATTTGATGAAAGTAACCGAAGGCCTACTGCTATTCAACTTCAAGGCCAGAATTCAGCTGAAGATCTTGATAATGCTGATACTAATGAAAATGGTTTTGACAGAGAAGAATATGAGAACTGCACGGCATGGAGTGATGATCATGGTGACCAAACAGTTGTTGCTGATGCCAATGTAGGCTATAATGATGCAGATCCAAGTTTTCCAAGTTACCCTCAGGACAATGAGGAGCCATTTCCTTCCCCAGAAGCGGTTATGGATGACAGATTTGAAAATGTTGATGGGTATTTATTTTTGAGTCTGGGTTTTAGTTCAAAACAAAACGCATGGGCAGGGCCTGATCATTGGAAGTATCGAAAATCCAAAGTCGCAGAGGTTCATCCTACTTCTGAAGATGGGTCGACACTAAAAAGTAGGCAGCCAAAGAGTAAGAGACAGGCTGAAGTTGAATTAAATTTCACAAATTCTCTTGAGAAAAAAATGCTAGATACATTTTCTCCTCCCAAGAATCCCAAATTGTTACTGCTCCCTGAAAGCAGATTGCCTTGCAATACAAAACTTCCTGAGGACTGCCACTATCAGCCAGAGGATCTTGTCAAAGAACAATCCAATGAATATGAATCATTTCCTTCGTGGGATAATGGAAGTGTTTGTGGGGATGATGCTAGTGACTACGGAGGTGATCATAGTGACATGGAGGACTCCAACACTCTTATTACTCAGCCTCGTCAGGTCAATAAAATTGAAGTTCAGTATGACAAGACTTCCAAACAGGTTGACGTTCATGCACTGAAAATTACTCTTTGGGACCATGTTCAAGAATCTGTTAAACTTCCTTCAGAGGGTCAAAAAGATTCCTTATCTTTCAGGAATATATTGGCCAACTTTCCTAGCGAATGCAATGCTGCTGCAACAATTAGTGACATCTCTCCTCATTTGTGCTTCATATGTCTATTGCATTTGGCAAACGAGAAAGGATTGAGCATTCAAAACACCCCCAACTTGGATGATCTTGCCATACAGCTTCCACATATGGGGACAATGATACTGGTGAAACACGTCCAAGAAAGCATTGGAGTGAGTAACAAGTCTTTTGTGGTTGGAGGTTGCAAATATCAGTTTGCTTATGGTGGTTTTAACACAAGTGAAGAAAATGTCAGACCTATCATGATGTCTTGTTATTCTGTAGTGTACATGAAAGTATTCAACGCATGTTGTGCTCTTTATTTTATTCTCCACTCCATCCCGTTTCAGGCGTTTCTAATACTCAGGCTTTTACTAGTACTAGAATGA 2079 0.4305 MAETLSPNPTMGQKQRLRIQSPTSPFFLGSNDDQLERAQARAARAAAIRRKSLAPSQPPLQANSDPCLNKQQILVLFQNCIKLASENASCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQAAEEDTTLDGVNIESGQEESKKETSKKSSLPESTLESSFEALNVKKFDAAFVVDPLYRQTTAKFDEGGAKGLLMNNLGVYGGCRVLFDSQEVPAKCMASQNQSDISDTIDISFVRDCIEQIVLDMCVKDEISPSLRTIVNQFDESNRRPTAIQLQGQNSAEDLDNADTNENGFDREEYENCTAWSDDHGDQTVVADANVGYNDADPSFPSYPQDNEEPFPSPEAVMDDRFENVDGYLFLSLGFSSKQNAWAGPDHWKYRKSKVAEVHPTSEDGSTLKSRQPKSKRQAEVELNFTNSLEKKMLDTFSPPKNPKLLLLPESRLPCNTKLPEDCHYQPEDLVKEQSNEYESFPSWDNGSVCGDDASDYGGDHSDMEDSNTLITQPRQVNKIEVQYDKTSKQVDVHALKITLWDHVQESVKLPSEGQKDSLSFRNILANFPSECNAAATISDISPHLCFICLLHLANEKGLSIQNTPNLDDLAIQLPHMGTMILVKHVQESIGVSNKSFVVGGCKYQFAYGGFNTSEENVRPIMMSCYSVVYMKVFNACCALYFILHSIPFQAFLILRLLLVLE 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0723 692 Pfam Condensin complex subunit 2 492 603 IPR022816 GO:0000796|GO:0007076
Aed5g0723 692 Pfam Condensin complex subunit 2 87 462 IPR022816 GO:0000796|GO:0007076
Aed5g0723 692 PANTHER CONDENSIN COMPLEX SUBUNIT 2 88 462 IPR022816 GO:0000796|GO:0007076
Aed5g0723 692 MobiDBLite consensus disorder prediction 270 288 - -
Aed5g0723 692 MobiDBLite consensus disorder prediction 388 409 - -
Aed5g0723 692 PIRSF Condensin_H 88 466 IPR022816 GO:0000796|GO:0007076
Aed5g0723 692 PIRSF Condensin_H 476 606 IPR022816 GO:0000796|GO:0007076
Aed5g0723 692 PIRSF Condensin_H 1 87 IPR022816 GO:0000796|GO:0007076
Aed5g0723 692 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 87 - -
Aed5g0723 692 MobiDBLite consensus disorder prediction 270 295 - -
Aed5g0723 692 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 87 IPR022816 GO:0000796|GO:0007076
Aed5g0723 692 PANTHER CONDENSIN COMPLEX SUBUNIT 2 88 462 - -
Aed5g0723 692 PANTHER CONDENSIN COMPLEX SUBUNIT 2 463 609 - -
Aed5g0723 692 MobiDBLite consensus disorder prediction 1 23 - -
Aed5g0723 692 PANTHER CONDENSIN COMPLEX SUBUNIT 2 463 609 IPR022816 GO:0000796|GO:0007076
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0723 K06676 - gmx:100799781 1023.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0723 5 5389157 5394128 Aed5g0723 5 5389157 5394128 ECH