Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0710 ATGGGAAAGCAGAGCGAGAGCCAGAAAACGGGGCTAGGTCGAGCCCTGGTGAGGCAGCACAACCAGTTGATCCAACAGAGCAAGGACAAGTCTCGCTTCTACAGGAAGAAGTTTCTCGAATCCTTCACCGAAGTCTCCGACATCGACGCCGTCGTCGAGAATTCCCTCGAACCCCTCCCCGAACTCGCCGCCACCGCTTCAACCACTCTCATCAGCCTTGATCCAGGTTTTGTGGCCGATGAAACGACGACGCCGGAAGAAGCCAGGAAGCAGCAGAAGCAAGAGGAGGCGCTCCACGCCAGCAGCCTCCGCGTTCCGCGCCGCCCGCCGTGGACTCCCGACATGTCCGCCGACGAGCTCAACGCCAGCGAAACGCAGGCTTTCTTGACTTGGCGTCGCAGCTTGGCGAGTGTGTGGAATCCTAAAGTTGATGATCCTCTCATGTTTCTTTTTTATCAGCTTGTTATGGTCGTTGATTCACGAGATCCTTTGTTCTATCGTTGTCCAGACCTTGAGGCTTATGCACAAGAGGTTGATGAGCATAAACGCACATTGCTTTTGGTTAATAAAGCAGATCTTTTACCTGCTTCTATCAGAGAGAAATGGGCAGAATATTTTCATGCTCATAATATTCTCTTCATCTTCTGGTCGGCCAAAGCTGCTACTGCAGTCCTAGAAGGCAAAAAGCTTGGTACATCATGGGAGGATGATAACATGGGGAGAACTAATAGCCCAGACACAAAGATATATGGAAGGGATGAACTTTTGGCTCGCTTGCAATCAGAGGCAGAATTGATAGTTGACAGGAGGAGAAATTCAGGCTCCTCTGGCGCAGGAGCATCTAACATCAAATCCCCTGCTGAAGATACTGATGGTAGCTCATCATCGAGTAACGTAGTTGTGGGATTTGTTGGATATCCTAATGTGGGGAAAAGTTCAACTATTAATGCTCTGGTTGGTCAAAAACGCACCGGTGTCACCTCTACCCCAGGGAAAACAAAGCACTTTCAGACATTAATTATGTCTGATAAGCTGACCCTTTGTGATTGTCCTGGATTAGTTTTTCCATCCTTCTCAAGCTCAAGATATGAGATGATTGCTTGTGGGGTGTTGCCTATTGATAGGATGAGTGAACACAGGGAATCTGTCCAAGTTGTAGCTGATAGAGTCCCAAGACATGTCATCGAGGAGATTTATAAGATAAGGCTTCCTAAACCCAAGTCATATGAGTCCCAATCACGCCCCCCTCTAGCATCTGAACTTTTGAGAGCATATTGTACTTCTCGTGGGCATGTTGCCTCAAGTGGACTCCCTGATGAAACCAGGGCTTCCCGTCAGATGTTGAAAGATTACATTGACGGAAAGCTGCCTCACTATCAAATGCCTCCAGGATCATCAGATGAGGAACAAGCTCTGGAAGAACCTGCTGGACATGACTCGGATGACTCTGATGCATCAGATTCATCAGGTATTGAAGATTCTTCAGATGTTGAGGGTGAACTTGCTCCAAATCTTGAACATGTATTGGATGACCTCAATTCATTTGACATGGCTAATGGACTTGCTCCAAAGAATACTACTGTTAAGAAGCCCAAGGCATCTCATAAGCACAACCATAAAAAGCCACAGAGGAAAAAAGATCGCACTTGGAGAGCTGGAAACGATGATGCTGATGGGGCGCCGATTGCAAGATTCTTTCAGAAACCAGCAAATACAGGTCCTCTGAAGGTTGGGTAA 1737 0.4755 MGKQSESQKTGLGRALVRQHNQLIQQSKDKSRFYRKKFLESFTEVSDIDAVVENSLEPLPELAATASTTLISLDPGFVADETTTPEEARKQQKQEEALHASSLRVPRRPPWTPDMSADELNASETQAFLTWRRSLASVWNPKVDDPLMFLFYQLVMVVDSRDPLFYRCPDLEAYAQEVDEHKRTLLLVNKADLLPASIREKWAEYFHAHNILFIFWSAKAATAVLEGKKLGTSWEDDNMGRTNSPDTKIYGRDELLARLQSEAELIVDRRRNSGSSGAGASNIKSPAEDTDGSSSSSNVVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIMSDKLTLCDCPGLVFPSFSSSRYEMIACGVLPIDRMSEHRESVQVVADRVPRHVIEEIYKIRLPKPKSYESQSRPPLASELLRAYCTSRGHVASSGLPDETRASRQMLKDYIDGKLPHYQMPPGSSDEEQALEEPAGHDSDDSDASDSSGIEDSSDVEGELAPNLEHVLDDLNSFDMANGLAPKNTTVKKPKASHKHNHKKPQRKKDRTWRAGNDDADGAPIARFFQKPANTGPLKVG 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0710 578 MobiDBLite consensus disorder prediction 270 294 - -
Aed5g0710 578 MobiDBLite consensus disorder prediction 471 485 - -
Aed5g0710 578 PRINTS GTP1/OBG GTP-binding protein family signature 347 362 IPR006073 GO:0005525
Aed5g0710 578 PRINTS GTP1/OBG GTP-binding protein family signature 301 321 IPR006073 GO:0005525
Aed5g0710 578 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 409 IPR027417 -
Aed5g0710 578 MobiDBLite consensus disorder prediction 529 547 - -
Aed5g0710 578 PANTHER GTPASE LSG1-1 7 541 - -
Aed5g0710 578 MobiDBLite consensus disorder prediction 455 578 - -
Aed5g0710 578 Gene3D - 360 462 IPR023179 -
Aed5g0710 578 PANTHER LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED 7 541 IPR043358 GO:0003924
Aed5g0710 578 MobiDBLite consensus disorder prediction 82 117 - -
Aed5g0710 578 MobiDBLite consensus disorder prediction 274 294 - -
Aed5g0710 578 MobiDBLite consensus disorder prediction 83 102 - -
Aed5g0710 578 CDD HSR1_MMR1 154 356 - -
Aed5g0710 578 Gene3D - 152 357 IPR027417 -
Aed5g0710 578 Pfam 50S ribosome-binding GTPase 301 357 IPR006073 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0710 Aed-Chr5 5281877 5286245 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0710 K14539 - gmx:100817523 980.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0710 5 5281877 5286245 Aed5g0710 5 5281877 5286245 ECH