Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0695 ATGATGATATTCATATTCATACGAAAGAACATGATGATGATCACTCTACTAATTATAGTGCTCCTCTTGGTTGTGAAGGGTTTTCCACTACACACGAGTGAACGGTGGATTGTGGATGAAAATGGGAAGAGGGTGAAGCTAGCATGTGTGAATTGGGTGTCCCATTTGGATGTTGTGGTGGCTGAGGGCTTAAACCAACAACCTTTGGATGTGATTTCAAAGAGAGTCAAAACCATGGGGTTTAACTGTGTAAGACTCACATGGCCAATTCAATTGGTCACCAATGACTCCCTTGCTTCTCTCACTGTTAGAAAGTCTTTCCAAAATCTCGGACTTATTCAATCCTTGAATGGTGTCCAAGCCTTCAACCCCTCCATCGTCGATCTTCCCCTCATCAAAGCTTACCAAGCAGTGGTGAAAAGCTTGGGTGAGAAGGAAGTAATGGTGATTTTGGACAACCACGTGAGCAAGCCAGGGTGGTGCTGCGGTTACTCGGACGGCAGTGGCTTCTTCGGGGATCAGTATTTCGATCCTCACCTCTGGATTATTGGCCTTACCAACATGGCCACTCTTTTCAAAGGGGTCACTAATGTTGTAGCCATCAGCTTGAGAAATGAGCTACGAGGTCCCAAACAAAATGTCAACGATTGGTACAGGTACATGCGGCAAGGAGCAGAAGCCGTGCATGTGGCAAATCCAGATGTTCTTGTGATTCTCTCTGGCCTAAGCTTTGACACGGACCTATCATTCATAAGAAACCAAGAAGTGAAACTGAGTTTTAATGGGAAACTAGTGTTTGAGGTGCATTGGTACAGCTTCAGTGATGGTGAAGCATGGAGCTCAGGGAATCCAAACCAAGTGTGTGGGGAAGTCACAGGGAATGTGATGACAAGTGCAGGGTTCTTGTTGGTCCAAGGGTGGCCATTGGTTGTGAGTGAGTTTGGTGTGGACTTGAGAGGCACAAATGTGGGTCACAAAAGGTACCTAAACTGCTTTATGGCACTGGTGGCCCAACTTGACTTGGATTGGGCCTTGTGGACATTGGGTGGGAGTTATTACTTTAGACAAGGAGTTGTTGGAATGGAGGAGTATTTTGGTATTCTCAATTCGGATTGGACCCAGGTTAGAAACACAGCTTTCTTGCAAAGGATCTCTGCTATTCAACTTCCTTTTCAAGGGCCAGGGTTATTAGAAGCTACACCATACAAAGTGATTTTTCACCCATTGACAGGTCTTTGCATCCTAAGAAATTCACAGGTTGAGGCATTGAGGCTTGGACATTGTTCTAACTCTGATGGATGGGAATACACAGACCAAAAGACACTATCAATAAAGGGCACCTATTTCTGTCTACAAGCAGAGGAAGAAGGGAAGCAAGCAAAACTTGGAAATGTGTGCTCAGGTCCCAATTCAAGATGGGAAATGATCTCTGATTCAAAGATGCACCTCTCAAGTCAAATCAACAATGCTTCTAGTGTGTGTCTTGATGCAGACACCACCACCAACAACAACTTCATTGTCACCAACACTTGCAAATGCCTCAGCAAAGATAACACTTGTGACCCTGGAAGCCAGTGGTTCAAACTTGTTGACAGCACAAGGAAGTCAACCTCCACATTATCTGTTGACTCCATGTTGAATTTCTTGGAAAACAAAATTTCTAGAAACCGTTGA 1674 0.4456 MMIFIFIRKNMMMITLLIIVLLLVVKGFPLHTSERWIVDENGKRVKLACVNWVSHLDVVVAEGLNQQPLDVISKRVKTMGFNCVRLTWPIQLVTNDSLASLTVRKSFQNLGLIQSLNGVQAFNPSIVDLPLIKAYQAVVKSLGEKEVMVILDNHVSKPGWCCGYSDGSGFFGDQYFDPHLWIIGLTNMATLFKGVTNVVAISLRNELRGPKQNVNDWYRYMRQGAEAVHVANPDVLVILSGLSFDTDLSFIRNQEVKLSFNGKLVFEVHWYSFSDGEAWSSGNPNQVCGEVTGNVMTSAGFLLVQGWPLVVSEFGVDLRGTNVGHKRYLNCFMALVAQLDLDWALWTLGGSYYFRQGVVGMEEYFGILNSDWTQVRNTAFLQRISAIQLPFQGPGLLEATPYKVIFHPLTGLCILRNSQVEALRLGHCSNSDGWEYTDQKTLSIKGTYFCLQAEEEGKQAKLGNVCSGPNSRWEMISDSKMHLSSQINNASSVCLDADTTTNNNFIVTNTCKCLSKDNTCDPGSQWFKLVDSTRKSTSTLSVDSMLNFLENKISRNR 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0695 557 Gene3D Glycosidases 28 389 - -
Aed5g0695 557 Gene3D - 404 527 - -
Aed5g0695 557 ProSiteProfiles Lectin domain of ricin B chain profile. 470 526 - -
Aed5g0695 557 SUPERFAMILY Ricin B-like lectins 398 529 IPR035992 -
Aed5g0695 557 Pfam Ricin-type beta-trefoil lectin domain 409 512 IPR000772 -
Aed5g0695 557 CDD RICIN 402 511 IPR000772 -
Aed5g0695 557 Coils Coil 549 557 - -
Aed5g0695 557 Pfam Cellulase (glycosyl hydrolase family 5) 64 349 IPR001547 GO:0004553|GO:0071704
Aed5g0695 557 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 12 545 - -
Aed5g0695 557 SUPERFAMILY (Trans)glycosidases 29 378 IPR017853 -
Aed5g0695 557 PANTHER GLYCOSIDE HYDROLASE FAMILY 5 PROTEIN 12 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0695 Aed-Chr5 5072699 5074528 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0695 28 539 Glycoside Hydrolase AT1G13130 57.864 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0695 - - gmx:100816102 911.368