Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0679 ATGGCGCCAAGGAAACCTCGCGAGCGTGAAATGCTGTTCGACTCCGCCGTTATCGCGCTCGTCTTCATCCTCGTCGCCTGCGTCGACCTATGCGACGGCGCCACCGTCGTCGACGTCTACCGCCTCATCCAGTACGACATGTCCGGCGTTCCCTTCGGATCTCGACTCGCCAGCCTCAACCATCACGCCGCCTCGCTCCATTTCTCTCCGCACGCCGATCTCTCTCGTACCGTCCTCCTCATACCACTTCGCGAACTCAACATGTCTTTTGTTAAAGAATATATTGCTGAAAGCAAGCCTCTTGGGGGTTTAATACTTTTGCTTCCCCGGATGTTCAGTTTTGCAAACAAAGATGGTATGGGAAGTAATAATCCAGACGGGAGTAAAGAACTGCTGAAGAATTTATTGGATGAACTTGAACAAATACTTATACACTCCAACTTACCCTATCCTGTTTATTTTGCATTTGAGGATGACAACATTGATGCTGTGTTAACTGATATCAAGAAGAATGATGTCTCTGGTCAGCCTGCTACTGCAACAACTGGCGGATACAAATTTGTTGTTTCAGCTCCAGAACCAAAAAAAGTTGTATCTCCTCCCATTACAAATATTCAGGGATGGTTGGCAGGACTGAAGACAGACGATGATGCTCATCAATTACCCACCATTGCGATAGTGGCATCCTATGACACCTTTGGGGCTGCTCCTGCATTATCAGTGGGGAGTGATAGTAATGGAAGTGGCATTGTGGCTCTTCTTGAAGTAGCTAGGTTGTTTTCTCTCTTATATTCTAATCCAAAGACAAGAGGACAATACAATTTGCTGTTTGGGCTAACGTCTGGTGGGCCTTACAACTACAATGGAACCCGTAAGTGGCTTCGGAGCTTTGATCAACGTCTGCGTGAGAGCATTGACTATGCTATTTGCTTAGATAGTATTGGCTCTTGGGAAAATGAATTGTGGATTCATGTATCTAAGCCTCCAGAAAATTCCTTTATTAAGAAAATTCTGGAAGATTTTTCAAGTGTTGCAGAAGAATTAGGCTTTAAAGTGAATCTGAAGCATAAGAAAATAAACATTTCCAATCCTCGAGTAGCTTGGGAGCATGAACAGTTTTCAAGGCTGAGAGTTACTGCTGCCACCCTCTCTGAACTCTCTACAGCGCCTGAATTGCTAGAAAATACTGGTGGCTTGGTTGATGGCAGGCATTTTGTCAATGAAGCGGCTATTGTCAGAAGTGTGAAATTAATTGCCGAGAGTCTTGCGAGGCATATTTATGGACACCAAGGAAAGAACATTCAGATCTTTGCAGACAACAGTAACTTGGCTGTCAATCCTTCTTATGTTAGATCATGGTTAGATGTTTTGTCCCAAACACCTCGAGTTGCTCCATTTTTCTCAAAAGAGGATCCTTTTGTCATGGCGCTGAAAAAGGAATTAGCAGACCATACAGATGAGGTAAATCTGCATAGAGATGTGCTAGATGGGATATTCACTTTCTATGATTCAACTAGGGCAAAGCTGAACATATATCAGGTTGCCAGTGTCACATTTGACTTGCTGTTACTTCTAGTATTGGGATCGTATTTGATTGTGCTCTTCAGTTTCTTGGTCATCACCACGAGGGGTCTTGATGATCTAATCAGTCTATTTCGGCGGCCTCCATCTCGAAAAGTGAAAACTGCATAG 1692 0.4409 MAPRKPREREMLFDSAVIALVFILVACVDLCDGATVVDVYRLIQYDMSGVPFGSRLASLNHHAASLHFSPHADLSRTVLLIPLRELNMSFVKEYIAESKPLGGLILLLPRMFSFANKDGMGSNNPDGSKELLKNLLDELEQILIHSNLPYPVYFAFEDDNIDAVLTDIKKNDVSGQPATATTGGYKFVVSAPEPKKVVSPPITNIQGWLAGLKTDDDAHQLPTIAIVASYDTFGAAPALSVGSDSNGSGIVALLEVARLFSLLYSNPKTRGQYNLLFGLTSGGPYNYNGTRKWLRSFDQRLRESIDYAICLDSIGSWENELWIHVSKPPENSFIKKILEDFSSVAEELGFKVNLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSTAPELLENTGGLVDGRHFVNEAAIVRSVKLIAESLARHIYGHQGKNIQIFADNSNLAVNPSYVRSWLDVLSQTPRVAPFFSKEDPFVMALKKELADHTDEVNLHRDVLDGIFTFYDSTRAKLNIYQVASVTFDLLLLLVLGSYLIVLFSFLVITTRGLDDLISLFRRPPSRKVKTA 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0679 563 Pfam Nicastrin 224 361 - -
Aed5g0679 563 ProSitePatterns EF-hand calcium-binding domain. 244 256 IPR018247 -
Aed5g0679 563 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Aed5g0679 563 Gene3D Zn peptidases 127 425 - -
Aed5g0679 563 PANTHER NICALIN 7 562 IPR016574 GO:0009966|GO:0016020
Aed5g0679 563 SUPERFAMILY Zn-dependent exopeptidases 147 387 - -
Aed5g0679 563 CDD M28_nicalin_like 136 429 - -
Aed5g0679 563 PIRSF Nicalin 3 558 IPR016574 GO:0009966|GO:0016020
Aed5g0679 563 PANTHER NICALIN 7 562 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0679 5 561 EF-hand Containing Proteins AT3G44330 73.036 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0679 - - gmx:100779713 1055.05