Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0677 ATGACTCGCATTTTGGTTCAGAGGGGTTCTTCAGGCGGTGGTTCTTCATCGAACCCCAACCGGAGTGGTGGCGGTGGCGGTGGGTCTTCTTCTAATTCCTCGGCGCGGCCGGAGCAGCAGGTTCCGGCTTCGCCGGAGAATAGCGACGAGGTTGTTGTTGTTGTGTCGGATGAGGTTTTGGAGAGTGGTGATAAGGGGAAGAGTGAGGAGGGTGTTCATTTTGAGCAGGGTGATGGGTCCTGTGAAGATGACGTGGCTGCTGCTGCTGCTTCTGCTGTTGTTGTTGAGAGTGATGTTAGGGAGGAGATTGTGAAGGGCTTGAGTGGGCTTAGAGTTGGTGAAAGGGTTGTTTCAGAGAGTGAGGGTTCCAGTGGGGATTCTTCTACACTCCCTGATGGTGGTGGTGGCGGCTCGTGTCCCCCTCCGCCCCCAGTGCCGCCTCCCAAGCCTTCTGCGACGGTGAACTTGAATTCTAGGAGGAGTTTGAATGCTGGCAGTGTGGGATCGTCGAGGAGGGCGGCTGCGTGGCCGGTCGTTTCTGCTAGGACTTCGCCTGCTGGGTCTAAGCCGTCTTCTCCCAGGTCACATAATGAAAGTGAGGGGTACAATAGTGCTGATGAACAGAAGCCTTGCCTGGTTTCATCTTATGATGATTTTGAAAGGGAGCGGCAGTTTGAAATTGATATCAGAAGGGCAAAAGGTTGTGAAGTAAAAAAAATGATGGAGGATGGAAATTGTCTTTTCCGAGCTGTTGCAGATCAGGTGTATGGGGACTCTGAAGCGTATGATGTGGTCAGACAGATGTGCATAGATTATATGGAGAGAGAGAGAGATCACTTTTCTCAGTTTATAACTGAAGGTTTCACATCTTACTGCAAGAGAAAAAGAAGAGATAAGGTCTATGGAAACAATGTTGAGATCCAAGCCATGTGTGAAATGTATAATCGCCCAATTCACATATACTCCTACACCACAGAACCTATCAATATCTTTCATGGAAGCTACAACACTGACACGCCACCAATTCGATTGAGTTTTCATCATGGGAATCATTACAACTCCCTTGTTGACCCACGGAGCTTGGCAATTGGTGCTGGGCTTGGGTTCAGCAGCCTTCGTGGAACAACAAATGTTGACAAAAATCAAGTCAAGGCTGCTATTAAAGCTCAACAGGACCAACAGATCAATAATGCACTTTTAGCCGAGGGTCAGTTTTATTCTGATCTTGAGCTCACAGAAAAGGAAATTGAACGCATGGTGATGGAAGTTTCTCGAGCTGAGTATGCAGATAGTACGTTCAAGCAACATCTTGGCGATAGAGAGTCCTCTACCTCAAATGCTGAACCATCATCTTCTGGAGCAACAGGATCATCAGGCACGGATCCCAAGACGGGACATGGGGAAGAGCATGGTTGTGATCTGAGTAGCGGTATGCAGATGTTACTATCAATGGGATTCAGTTACATGCAAGCCATTGAGGCTTACAGCATATTTGGGGACGACGTTGATTCAATGGTTTGTTACCTGTTAGAAACCGGCAGTAGCAGCAGACGTAAAGGCAAGGCCACTGAATAA 1575 0.4825 MTRILVQRGSSGGGSSSNPNRSGGGGGGSSSNSSARPEQQVPASPENSDEVVVVVSDEVLESGDKGKSEEGVHFEQGDGSCEDDVAAAAASAVVVESDVREEIVKGLSGLRVGERVVSESEGSSGDSSTLPDGGGGGSCPPPPPVPPPKPSATVNLNSRRSLNAGSVGSSRRAAAWPVVSARTSPAGSKPSSPRSHNESEGYNSADEQKPCLVSSYDDFERERQFEIDIRRAKGCEVKKMMEDGNCLFRAVADQVYGDSEAYDVVRQMCIDYMERERDHFSQFITEGFTSYCKRKRRDKVYGNNVEIQAMCEMYNRPIHIYSYTTEPINIFHGSYNTDTPPIRLSFHHGNHYNSLVDPRSLAIGAGLGFSSLRGTTNVDKNQVKAAIKAQQDQQINNALLAEGQFYSDLELTEKEIERMVMEVSRAEYADSTFKQHLGDRESSTSNAEPSSSGATGSSGTDPKTGHGEEHGCDLSSGMQMLLSMGFSYMQAIEAYSIFGDDVDSMVCYLLETGSSSRRKGKATE 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0677 524 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 466 512 IPR015940 -
Aed5g0677 524 MobiDBLite consensus disorder prediction 152 168 - -
Aed5g0677 524 MobiDBLite consensus disorder prediction 438 462 - -
Aed5g0677 524 MobiDBLite consensus disorder prediction 184 199 - -
Aed5g0677 524 MobiDBLite consensus disorder prediction 1 80 - -
Aed5g0677 524 PANTHER OTU DOMAIN-CONTAINING PROTEIN 5-LIKE ISOFORM X1 33 480 - -
Aed5g0677 524 MobiDBLite consensus disorder prediction 1 46 - -
Aed5g0677 524 MobiDBLite consensus disorder prediction 433 472 - -
Aed5g0677 524 MobiDBLite consensus disorder prediction 107 207 - -
Aed5g0677 524 Gene3D - 217 368 - -
Aed5g0677 524 MobiDBLite consensus disorder prediction 136 151 - -
Aed5g0677 524 PANTHER OTU DOMAIN CONTAINING PROTEIN 33 480 - -
Aed5g0677 524 ProSiteProfiles OTU domain profile. 235 358 IPR003323 -
Aed5g0677 524 SUPERFAMILY Cysteine proteinases 223 358 IPR038765 -
Aed5g0677 524 SUPERFAMILY UBA-like 477 511 IPR009060 GO:0005515
Aed5g0677 524 Pfam OTU-like cysteine protease 243 348 IPR003323 -
Aed5g0677 524 MobiDBLite consensus disorder prediction 60 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0677 Aed-Chr5 4951026 4956667 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0677 K12655 - gmx:100809162 800.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0677 5 4951026 4956667 Aed5g0677 5 4951026 4956667 ECH