LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed5g0655	ATGTTGAGTTCTGGGAATAACTTGAACAGTAGCAGCAGCAGTGGGATAACTTCTTCGGATATGCCACCCTTGCCCCAGTGTTTGGCACTAGATTCACTTACAGTAGGCAATAGAAAATATACAGGAGAGCTAAGGAGGGTTCTTGGTGTTTCTGCTGCAAACACATCTGAAGACCATTCTTTCGGAGGTCCACATCCTAAACCCATGGCTCCTGGAGCCTCAGGGGATTTAAAGCACTTCAAAGAAAGTGTACAAGATGCCTCCAGAAAAGCAAGGGATAGATCAAAAATGTTTGGGGAATCTTTGTCTAAATTGGAAAAGTATGAGGCATTGAACATAAAGAAGCGTCAAAGGACTGATTTATCAAGTGATAGGGGAGGTGGAGTAAACTTGACAAAGATGGGTAGCCAGATTCACAAAACCCCTAATGATAATCTAACTCCGAGATCAGAAGCAAGGGCCTCAAGTTCAATGCTGAACAAGCGAATTCGTACAACAGTGGCAGATGTGCGGGAGGAAAGTAGGTCTGCTGCTACTGGAAGGCCACGGATGGTCACAGAGAAGGATGGAAATCTGGTTCAGACACTTGGTGGGAGCTCTGTTCGAAATGAAGAGAAAACTCGCAGATTACTTGCTGGAGGCGAAGGGTTGGATCAAAAAATAAAGAAGAAGAGGTCTGTTGGAACTGTGGGAAACAGAGTTATCACTGGTGAAAGGGATGTAAAACGGACTGCTCTTCCAAAGGCAAATGCTGATCTGAAAATGCGACTTTATGATGCTCAGGGTTTCAGATTGAAGTCTGGACCTGGTGGAATCAAGTCTGAGGGCTCTTCAGAGCTTACTAATACAGGTGTGCGCATGATGCTTAAAAGTGAGCAAGGTGTTTCTCTTCACAGTGAACACATAGCTGAGCAGAGAGTTGTTGCAAAAGGAAACAACAGGGGAAACACTCATGAGGACCCAGCTAGCAGCCCTAGCATGCTAACAAAAAACAAGGTATCTCGGGCGCCAAGAACAGGTTCAGTTAGTGCACTAGAATCATCTAACATTCAACCTTCATCTACAACATTTCCAGGTTCTTCTATACATCCAATGACCCAGTGGGTTGGTCAGAGGCCACCTAAAAATTCACGCTCACGAAGAGTTAAAGTAGTTTCTCCTGCCTCACGCAATCTTGAAGTTCAGGTCTCATCCGAAGGCTGTCTAACTTCTGACTTCAGTATAAAAGCTTCTTCTGCTGGCAACAATGGATTTCAACTTGCAAACAGTATAGACAACAGTACTCCTAAATATAAAAGGCCTCCTGATGATATTTCATCTCCCTTTGGATTATCTGAAAGTGAAGAATCTGGAGCTGGGGAAAACAAAATAAAAGAGAAAGCTGTGAATGGAAGTGACTTTGCTATGGCTGCAGATAAGGCTGGGGCTTCTATGTTTCAGATGAGGAAGAATAAGATATCAACAGATGAATCTGGAGATAGTCTGCAGAGACAAGGAAGAAATGGAAGGAATTTATCATTAGTAAGGCCAGGCCTCCCTTCTGGGAGGGAGAAGTCAGAGAATGTACCAACAATGAAGCCAGTACAGGACATGAAGCCTAATGATAAGAGTAAAACCAAATATGGGCGCCCTCCTTCAAAAAAGCAGAAAGAGCGGAAAATTTTGACTCGTGTAGGGAAGCAACTAAACATTAATTCTTCTGATTTAGGAGGAGAATCTGATGATGATCATGAAGAATTATATAAAGCTGCAAATTCTGCTCATAATGCTAGCAACCTTGCTTGTTCGGGTCCATTTTGGAATAAAATGGAGTCTATTTTTGCTTCTATCAGCTTGGATGATGCATCTTACCTGAAGCAACAGCTCAATATTGCTGAGGAATTTGATAAAAGTTTATCTCATATGTTTGGCATTGATCATGATCTGTTGGGTGTTGTTATAAATAACAAGACCACTCAAGGTTCAGAGGAAAGAAAGAGAAGTCACTGTGATGAAGACTCAACTAAGTTTGATGCTTTAGGTGGAAAGAAGGACGTGGAAAGACTGGACAAGGTTACCCCACTATTCCAAAGACTTCTTTGTGCTCTAATTGAAGAAGATGAAAGTGAAGAATCATATCACCAAAGTGATGCAAAAAATATATCTCGACAATGTGCTAGTGATGATTCTCACTGTGGTTCTTGTAATCAAATTGATTTTGAACCCAAAGATCGGGATAGAATGGATTCGGAAGTTGAATCAGAGGTGGATCTTCAAATTCAGAAGAGCTGCATGTTGGATAGACTATCTTGTGATAAGAGCACCACATCCAACACATTTAGATACCCAAACACATCAAGTTCTTTACAAAGCACTGGAGTTTGGCAGGGAGATGAAGAATTTTCTCTTTCAGATATTACACACACTGGGGAAATATGTTCAAATGATCTTGATCAACTGCAGCCTGCTGAATTAAGTGTTCTTAGCTTTCCGTCTCCTGATGGCCAGTATCAGCTGATGTCACTGGATGACAGACTGCTGCTTGAGTTGCAGAGCATTGGCTTATATCCTGAAATATTGGTAGGCTTTCATTGCATATATGGAATTACAAAATACCATAGTTATTTGGAGCTTACTAGATTCATGGCTATACTCCTTAAACTTCCTTTGCTGGTGCAGCCTGATTTAGCTGAGGAAGATGAAGCTATAAATCAAGACATTGTGAAACTTGAGAAAGCACTGTACGAACAGAATGGGAGGAAGAAGAATAACTTGGACAAAATTGATAGAGCTGTTCAAGAAGGGAGGGATGTGGAAAGACAGAAGATTGAGCAAGCTGCATTTGACCATCTTACTGAAATGGCTTACAGAAAGAGATTGGCATGCCGTGGAAACAAAAATTCAAAAGGTGCAGTTCACAAGGTGTCTAAACAAGCTACTTTGGCTTTTCTCAAACGTACTCTTGGAAGATGTAAAAAGTATGAAGAAGCTGGCATTAACTGCTTCAGTGAACCTACCCTACAAAATATTATGTTTGCCCCACCTTCACGTGAGAATGATGCACAACCTGCAGATTGCATGGTCTCTGGGACAGCCAGCAATACATGCAACAAAGCTTCCCTTCAAATTGAAGCCAGAAAATCAGGTGCAGTTTCTAGTGCTTCTGAGAAATATGATTGCCATAGAGATTATGCAGACAGGGGATTGGTTGATTCTTTTCAAGGTTCAATTCAGTCATCAGAGCAAGCATCATCCAAGAATGGGTCTGTGTTTATCAAGGAAAAGAAGAGGGAAATGCTGGTCAATGGTTCTTCCTCAAGAGCATCAAATCTTGATGGTGCTGTTCATGGTGGAGTGAAGGGAAAGAGAAGTGAGAGAGATAGGAATCAAAGCCGGGATCAGAGCAGACAAAATTCTATTGGCAGAGCTGGACGCATGTTACTGGACAGTAGTAGCCCAAATGAGAACAAACCGAAAGCTAAGAAGCAAAAGAGTACTGCTGGTGGACATGATAGGTTTACGGAAGCAAAAGAATCTCCTCGTTTACCAATTCATGATACAATCAATGATGGTGGCAAAAATGGGGCTACATTATCTGGTAACCAGGACACTTCTCAAATAAAGGAATCCAATGACTTTGGGAATATGCCGCTACCTGACTTAAGTTCAATAGAAGAATTTGGTGGCACGCAGGATCTTAGTTCTTGGTTGAACTTTGAAGAAGATGGTTTGCAAGACCATGATTCTATTGGCCTTGAAATTCCGATGGATGACCTGTCAGATTTAAATATGCTTATGTGA	3780	0.4161	MLSSGNNLNSSSSSGITSSDMPPLPQCLALDSLTVGNRKYTGELRRVLGVSAANTSEDHSFGGPHPKPMAPGASGDLKHFKESVQDASRKARDRSKMFGESLSKLEKYEALNIKKRQRTDLSSDRGGGVNLTKMGSQIHKTPNDNLTPRSEARASSSMLNKRIRTTVADVREESRSAATGRPRMVTEKDGNLVQTLGGSSVRNEEKTRRLLAGGEGLDQKIKKKRSVGTVGNRVITGERDVKRTALPKANADLKMRLYDAQGFRLKSGPGGIKSEGSSELTNTGVRMMLKSEQGVSLHSEHIAEQRVVAKGNNRGNTHEDPASSPSMLTKNKVSRAPRTGSVSALESSNIQPSSTTFPGSSIHPMTQWVGQRPPKNSRSRRVKVVSPASRNLEVQVSSEGCLTSDFSIKASSAGNNGFQLANSIDNSTPKYKRPPDDISSPFGLSESEESGAGENKIKEKAVNGSDFAMAADKAGASMFQMRKNKISTDESGDSLQRQGRNGRNLSLVRPGLPSGREKSENVPTMKPVQDMKPNDKSKTKYGRPPSKKQKERKILTRVGKQLNINSSDLGGESDDDHEELYKAANSAHNASNLACSGPFWNKMESIFASISLDDASYLKQQLNIAEEFDKSLSHMFGIDHDLLGVVINNKTTQGSEERKRSHCDEDSTKFDALGGKKDVERLDKVTPLFQRLLCALIEEDESEESYHQSDAKNISRQCASDDSHCGSCNQIDFEPKDRDRMDSEVESEVDLQIQKSCMLDRLSCDKSTTSNTFRYPNTSSSLQSTGVWQGDEEFSLSDITHTGEICSNDLDQLQPAELSVLSFPSPDGQYQLMSLDDRLLLELQSIGLYPEILVGFHCIYGITKYHSYLELTRFMAILLKLPLLVQPDLAEEDEAINQDIVKLEKALYEQNGRKKNNLDKIDRAVQEGRDVERQKIEQAAFDHLTEMAYRKRLACRGNKNSKGAVHKVSKQATLAFLKRTLGRCKKYEEAGINCFSEPTLQNIMFAPPSRENDAQPADCMVSGTASNTCNKASLQIEARKSGAVSSASEKYDCHRDYADRGLVDSFQGSIQSSEQASSKNGSVFIKEKKREMLVNGSSSRASNLDGAVHGGVKGKRSERDRNQSRDQSRQNSIGRAGRMLLDSSSPNENKPKAKKQKSTAGGHDRFTEAKESPRLPIHDTINDGGKNGATLSGNQDTSQIKESNDFGNMPLPDLSSIEEFGGTQDLSSWLNFEEDGLQDHDSIGLEIPMDDLSDLNMLM	1259

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed5g0655	1259	MobiDBLite	consensus disorder prediction	1185	1205	-	-
	Aed5g0655	1259	PANTHER	SPECTRIN BETA CHAIN, BRAIN	1	853	-	-
	Aed5g0655	1259	MobiDBLite	consensus disorder prediction	1111	1126	-	-
	Aed5g0655	1259	MobiDBLite	consensus disorder prediction	531	553	-	-
	Aed5g0655	1259	PANTHER	OS05G0107300 PROTEIN	1	853	-	-
	Aed5g0655	1259	MobiDBLite	consensus disorder prediction	1	24	-	-
	Aed5g0655	1259	MobiDBLite	consensus disorder prediction	308	386	-	-
	Aed5g0655	1259	MobiDBLite	consensus disorder prediction	425	459	-	-
	Aed5g0655	1259	MobiDBLite	consensus disorder prediction	486	503	-	-
	Aed5g0655	1259	MobiDBLite	consensus disorder prediction	1127	1147	-	-
	Aed5g0655	1259	MobiDBLite	consensus disorder prediction	1094	1213	-	-
	Aed5g0655	1259	MobiDBLite	consensus disorder prediction	1	21	-	-
	Aed5g0655	1259	MobiDBLite	consensus disorder prediction	1148	1177	-	-
	Aed5g0655	1259	MobiDBLite	consensus disorder prediction	117	160	-	-
	Aed5g0655	1259	MobiDBLite	consensus disorder prediction	486	553	-	-
	Aed5g0655	1259	PANTHER	OS05G0107300 PROTEIN	887	1259	-	-
	Aed5g0655	1259	MobiDBLite	consensus disorder prediction	310	374	-	-
	Aed5g0655	1259	MobiDBLite	consensus disorder prediction	123	160	-	-
	Aed5g0655	1259	PANTHER	SPECTRIN BETA CHAIN, BRAIN	887	1259	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed5g0655	Aed-Chr5	4795667	4806532	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed5g0655	-		-	gmx:100817881	2182.91

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed5g0655	5	4795667	4806532	Aed5g0655	5	4795667	4806532	ECH