Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0651 ATGAAGGTTCAACATGCACCTGGGGAAGAAGAGAAGGTGATGACAAGGAAGCAGAAGGCTGAGTCCAAGGCACATGAAGTGGAGCATTCTCCTAAGAAGGCCAAGGTGGAAAATGATCATGATGGCCATGTCAATGGAAAATCTGATGTTGCAAAAGAATATGATGAGTTTTGCAAAGCAACAAACGAGCACCTTCCTCTGGAACAAATGAGAGAGATTCTGGAGGCTAATGGCCTTGATTCTTCTGGCTCTGATCTTGAAGTTAAACGTAGATGCCAAGACTTGATGTTTTATGGTCCATTGGACAAATGCTCGGTTTGCAATGGGAGTTTGGAGTTTGATGGAAGACGTTATGTTTGTAGAGGGTTCTACAGTGAGTGGGCTAGTTGCACTTTCAGCACCAGAAACCCTCCAAGGAAACAGGAACGTATTAAGTTACCTGATTCTTTGCTAAAGAAATATCAGGACCCGAGTCACAGGCCTCACAGGGATCTAGGCTTAGCTGAAAAACCCTTCACTGGAATGATGATATCTCTGATGGGTCGTCTTACTCGGACACATGTATGCACCACTGTCACTGTCAGGGCAACTTGTTTGATAGCTTCACCTGCTGAGCGAGAACGTGGTGGCACATCTAAACTTGCAGAAGCCATGGAGAAGGGTATACCAGTGGTTAGGGAGGCTTGGTTGATTGACAGCATTGAAAAGCAAGAGCCACAGCCTTTGGAAACTTATGATCTTGTCTCTGATCTTTCTGTGGATGGCAAGGGAATCCCCTGGGACAAACAAGATCCTGGGGAAGAGGCTATTGAATCATTCTCAGCAGAACTCAAGCTTTATGGGAAGAGAGGGGTCTATAAAGATTCCAAGTTGCAGGAACAAGGTGGAAAGATATTTGAAAAAGATGGGATATTATACAACTGTGCCTTCTCTGTTTGTGACCAAGGACGAGGACTGAATGACTACTGTGTCATGCAACTGATTGTTGTCCCAGAGAATCGTTTGCATCTGTACTTTAAGAAAGGAAGAGTTGGAGATGATCCAAATGCAGAGGAGCGTTTAGAAGAGTGGGACAATGTGGACGGTGCTCTGAAAGAGTTTGTGAGGCTCTTTGAGGAGATAACAGGAAATGAGTTTGAACCTTGGGAAAGAGAGAAGAAGTTCCAGAAGAAGCCTTTGAAGTTTTACCCCATTGACATGGATGATGGAGTTGAAGTTAGACACGGGGCACTAGGTCTTCGGCAACTAGGGATAACAGCAACACACTGTAAACTTGAGCCTTTGGTTGGAAATTTTATGAAGGTCTTGTGCAGCCAGGAGATATATAAATATGCATTGATGGAGATGGGTTATGACTCTCCGGACCTTCCAATAGGAATGGTTACAAATCTTCATCTGAAAAGATGTGAGGAAGTTCTCTTAGAATTTATAGACAAGGTGAAAACACTGAAAGAGACTGGGCCGAAGGCTGAGGCTGTTTGGAATGATTTTAGCCAAAGATGGTTCACTCTGATGCACTCCACAAGGCCTTTCAATTTTAGAGATTATCAAGAGATTGCAGATCATGCTGCTGCTGCCTTGGAGGGGGTGAGGGACATAACACTCGCTTCTCACCTCATAAGAGATATGAGTGGCTCAACCATTGATGACCCATTATCAGAGACATACAAGAAATCGGGGTGCTCAATCTCTCCCTTGGACAAAAGTTCAGATGATTACAAGATGATTCTGAAATACCTTGATAAAACTTATGAACCTGTCAAAGTTGGAGACATTGAATATGGGGTGTCAGTGGAAAATATTTTTGAGGTGCAAACAGGTGGTTGCCCTTCCTATGAGGATATAGTAAAACTACCAAACAAGGTTCTTCTATGGTGTGGAACACGAAGCTCAAACATTTTGAGGCATGTGCACAAGGGATTCTTGCCAGCAATATGCTCACTACCGGTTCCGGGTTATATGTTTGGCAAAGCTATTGTCTGTTCTGATGCTGCAGCAGAGGCTGCAAAATATGGTTTTACTGCTGTGGACAGGCCAGAAGGGTTCTTGGTTTTGGCCATTGCTTCTCTAGGAGATGAGATTACCGAGTTGAAAAACCCACCTGAGGATACATCATCTTTTGAGGAAAAGAAGGTTGGAGTGAAGGGGCTGGGGAAGAAGAAAACAGATGAATCAGAGCATTTTGTTTGGAAAGATGATATCAAAGTTCCTTGCGGTAAACTAGTTGCCTCAGACCATCAAGACAGCCCCTTGGAATACAACGAGTATGCTGTCTACGATCCTAAGCAGGCACGCATAAGCTACTTGGTGGGAGTGCAGTATGAAGAGAAGGGTGCGGTGATTGACACAGCTGAATGA 2358 0.4411 MKVQHAPGEEEKVMTRKQKAESKAHEVEHSPKKAKVENDHDGHVNGKSDVAKEYDEFCKATNEHLPLEQMREILEANGLDSSGSDLEVKRRCQDLMFYGPLDKCSVCNGSLEFDGRRYVCRGFYSEWASCTFSTRNPPRKQERIKLPDSLLKKYQDPSHRPHRDLGLAEKPFTGMMISLMGRLTRTHVCTTVTVRATCLIASPAERERGGTSKLAEAMEKGIPVVREAWLIDSIEKQEPQPLETYDLVSDLSVDGKGIPWDKQDPGEEAIESFSAELKLYGKRGVYKDSKLQEQGGKIFEKDGILYNCAFSVCDQGRGLNDYCVMQLIVVPENRLHLYFKKGRVGDDPNAEERLEEWDNVDGALKEFVRLFEEITGNEFEPWEREKKFQKKPLKFYPIDMDDGVEVRHGALGLRQLGITATHCKLEPLVGNFMKVLCSQEIYKYALMEMGYDSPDLPIGMVTNLHLKRCEEVLLEFIDKVKTLKETGPKAEAVWNDFSQRWFTLMHSTRPFNFRDYQEIADHAAAALEGVRDITLASHLIRDMSGSTIDDPLSETYKKSGCSISPLDKSSDDYKMILKYLDKTYEPVKVGDIEYGVSVENIFEVQTGGCPSYEDIVKLPNKVLLWCGTRSSNILRHVHKGFLPAICSLPVPGYMFGKAIVCSDAAAEAAKYGFTAVDRPEGFLVLAIASLGDEITELKNPPEDTSSFEEKKVGVKGLGKKKTDESEHFVWKDDIKVPCGKLVASDHQDSPLEYNEYAVYDPKQARISYLVGVQYEEKGAVIDTAE 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0651 785 CDD parp_like 422 773 - -
Aed5g0651 785 Gene3D BRCT domain 167 253 IPR036420 -
Aed5g0651 785 Gene3D - 47 160 - -
Aed5g0651 785 ProSiteProfiles PARP alpha-helical domain profile. 422 541 IPR004102 GO:0003950
Aed5g0651 785 SUPERFAMILY BRCT domain 191 258 IPR036420 -
Aed5g0651 785 SUPERFAMILY WGR domain-like 271 400 IPR036930 -
Aed5g0651 785 Pfam Poly(ADP-ribose) polymerase, regulatory domain 423 556 IPR004102 GO:0003950
Aed5g0651 785 ProSiteProfiles BRCT domain profile. 181 247 IPR001357 -
Aed5g0651 785 SUPERFAMILY Domain of poly(ADP-ribose) polymerase 422 558 IPR036616 GO:0003950
Aed5g0651 785 PANTHER DNA LIGASE 5 776 - -
Aed5g0651 785 SMART WGR_cls 306 389 IPR008893 -
Aed5g0651 785 Pfam WGR domain 306 385 IPR008893 -
Aed5g0651 785 CDD WGR_PARP1_like 296 402 - -
Aed5g0651 785 Gene3D - 418 558 IPR036616 GO:0003950
Aed5g0651 785 ProSiteProfiles WGR domain profile. 295 395 IPR008893 -
Aed5g0651 785 Gene3D - 560 775 - -
Aed5g0651 785 PANTHER POLY [ADP-RIBOSE] POLYMERASE 5 776 - -
Aed5g0651 785 Pfam Poly(ADP-ribose) polymerase catalytic domain 570 773 IPR012317 GO:0003950
Aed5g0651 785 ProSiteProfiles PARP catalytic domain profile. 550 781 IPR012317 GO:0003950
Aed5g0651 785 SMART PADR1_2 88 141 IPR012982 -
Aed5g0651 785 MobiDBLite consensus disorder prediction 1 44 - -
Aed5g0651 785 Pfam PADR1 (NUC008) domain 91 140 IPR012982 -
Aed5g0651 785 SUPERFAMILY ADP-ribosylation 560 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0651 Aed-Chr5 4769088 4773840 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0651 K10798 - gmx:100788978 1449.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0651 5 4769088 4773840 Aed5g0651 5 4769088 4773840 ECH