Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0625 ATGGCAACACCAAAACAGTCATATGAGCAGCAGCAACAACAAAATGCGCAGCGTGTGAGGAACTCGGGGATGATTAACTGCAATCAGAGTCCAATGAGGGATGACAAGGAAGAGGAGATGTCAAGATCAGCTCTTGCAATGTTCCGAGCAAAGGAAGAAGAGATTGAGAGGAGGAAAATGGAGGTGAGGGATAAGGTTCACACTTATCTTGGTCGAGTGGAGGAAGAAACAAAACGCTTGGCTGAGATTAGAGAAGAGCTTGAGGGTCTGATAGATCCAATGAGGAAGGAAGTTGCAATAGTTAGAAAGAAGATAGACAGTGTTAACAAAGAGTTAAAGCCACTGGGCCAAACCTGCCAGAGAAAGGAGAGAGAATACAAGGAATCCCTTGATGCTTTCAATGAGAAAAACAAGGAAAAAGCTCAACTTGTTACTAAATTAATGGAGCTGGTAACTGAAAGCGAGAAATTGAGGATGAAGAAGCTGGAGGAGTTAAGCAAAAACGTAGATACTCTGCATTGA 522 0.4291 MATPKQSYEQQQQQNAQRVRNSGMINCNQSPMRDDKEEEMSRSALAMFRAKEEEIERRKMEVRDKVHTYLGRVEEETKRLAEIREELEGLIDPMRKEVAIVRKKIDSVNKELKPLGQTCQRKEREYKESLDAFNEKNKEKAQLVTKLMELVTESEKLRMKKLEELSKNVDTLH 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0625 173 PANTHER RAB6-INTERACTING PROTEIN GORAB 9 172 IPR007033 -
Aed5g0625 173 MobiDBLite consensus disorder prediction 1 41 - -
Aed5g0625 173 PANTHER - 9 172 - -
Aed5g0625 173 Coils Coil 119 139 - -
Aed5g0625 173 Pfam Transcriptional activator 20 171 IPR007033 -
Aed5g0625 173 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0625 Aed-Chr5 4569074 4571489 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0625 - - ccaj:109798987 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0625 5 4569074 4571489 Aed5g0625 5 4569074 4571489 ECH
Aed2g1951 2 24079359 24082035 Aed5g0625 5 4569074 4571489 ECH