Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0609 ATGGTTGAATCTCAGCCAAAGTTCTTCGTGCCGGACTCAATCAGCGGCGGCGTGAGTTTCGACGTGGCGGCGCAGATTAGGATGGTGTGGGAATTGATCAAGGCGCCGCTGATCGTGCCTCTGCTGAACCTAGCCGTGTACATTTGCCTCGCAATGGCGCTGATGCTCTTCATGGAGAGGGTCTACATGGGCATTGTCATCATCCTCGTGAAGCTCTTCTGGAAGAAACCGCACCAGCGCTACAAGTTCGAACCCCTCGAGGACGACGAGGAACTCGGAAACTCCAATTACCCCGTCGTGCTCATTCAGATTCCCATGTTCAATGAAAAAGAGGTGTACAAGGTGTCGATTGGAGCAGCTTGTAATCTTTCATGGCCATCGGATCGTCTCGTGATCCAAGTGCTCGATGATTCTACTGACCCAACCGTCAAGCAAATGGTGGAGACAGAATGCCAGAGATGGGCGAGTAAGGGTCTAAACATAGTGTACCAAATCAGAGAGACGAGAGGAGGGTACAAAGCGGGTGCTTTGAAAGAAGGCCTAAAGCGTAACTATGTGAAGCACTGCGAGTACGTGGCGATTTTCGATGCTGATTTCAGTCCAGAGCCAGATTTTCTCAGACGTTCCATTCCTTTCTTGGTGGGCAACCCCGACATTGCTCTTGTTCAAGCTCGTTGGAGATTCGTGAATTCCAATGAGTGTTTATTGACAAGAATGCAAGAGATGTCCCTGGATTACCATTTCACAGTAGAGCAAGAAGTTGGATCGGCCACTCATGCTTTCTTCGGTTTCAACGGAACTGCTGGTATATGGAGAATAGCTGCTATCAATGAAGCTGGTGGGTGGAAAGACAGAACAACAGTGGAAGATATGGACCTTGCTGTTCGTGCTAGTCTTAGGGGATGGAAATTTTTGTACCTTGGAGACCTCCAGGCCAAAAGTGAGCTTCCTAGTACTTTGAGAGCCTTCAGATTCCAGCAGCACAGATGGTCTTGTGGTCCTGCTAATTTGTTCCGCAAAATGGTGATGGAAATTGTGAGGAACAAGAAAGTGAGGTTTTGGAAGAAAGTGTATGTTATATACAGCTTTTTCTTTGTTCGCAAAATCATAGCCCACATGGTCACATTCTTCTTCTTCTGTCTTGTGATTCCCCTCACAATCTTGATTCCTGAGGTTTATGTTCCAATCTGGGGTGCTGTTTATATTCCTTCAGTCATCACCATTCTCAATTCAGTTGGAACACCAAGGTCCATTCACCTTCTGTTCTATTGGATCCTCTTTGAGAATGTGATGTCATTGCACCGAACCAAGGCAACATTTATAGGTCTATTGGAATATGGGAGGGCTAATGAATGGGTTGTGACTGAAAAACTTGGTGACTCTGTCAGCAATAATAATAAGAAAAATTCAGGAGATGCTGCCAAGAAGAATAATGTCATCAAGGCCACTCCCAAAAAGACTCGATCCAAATTTGTTGAAAGACTTAATTATCTGGAGCTGGGATTTGCTGCATTCCTCTTCTTATGTGGATGCTATGATTATGTGCATGGGAAACACAACTACTTCATCTACCTCTTCCTTCAGACCATAACATTCTCAATTGTTGGATTTGGCTACGTTGGCACCATCGTGTAA 1635 0.4563 MVESQPKFFVPDSISGGVSFDVAAQIRMVWELIKAPLIVPLLNLAVYICLAMALMLFMERVYMGIVIILVKLFWKKPHQRYKFEPLEDDEELGNSNYPVVLIQIPMFNEKEVYKVSIGAACNLSWPSDRLVIQVLDDSTDPTVKQMVETECQRWASKGLNIVYQIRETRGGYKAGALKEGLKRNYVKHCEYVAIFDADFSPEPDFLRRSIPFLVGNPDIALVQARWRFVNSNECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGIWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQAKSELPSTLRAFRFQQHRWSCGPANLFRKMVMEIVRNKKVRFWKKVYVIYSFFFVRKIIAHMVTFFFFCLVIPLTILIPEVYVPIWGAVYIPSVITILNSVGTPRSIHLLFYWILFENVMSLHRTKATFIGLLEYGRANEWVVTEKLGDSVSNNNKKNSGDAAKKNNVIKATPKKTRSKFVERLNYLELGFAAFLFLCGCYDYVHGKHNYFIYLFLQTITFSIVGFGYVGTIV 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0609 544 Pfam Glycosyl transferase family group 2 191 399 IPR001173 -
Aed5g0609 544 PANTHER - 5 544 - -
Aed5g0609 544 PANTHER BNAC09G36340D PROTEIN 5 544 - -
Aed5g0609 544 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 89 317 IPR029044 -
Aed5g0609 544 SUPERFAMILY Nucleotide-diphospho-sugar transferases 95 380 IPR029044 -
Aed5g0609 544 CDD CESA_CaSu_A2 98 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0609 Aed-Chr5 4457722 4463108 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0609 5 544 Miscellaneous Gene Families AT5G22740 81.146 0.0 908
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0609 K13680 - gmx:100791645 1060.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0609 5 4457722 4463108 Aed5g0609 5 4457722 4463108 ECH