Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0608 ATGGGTACTCAGCTTCCAGATGAAAAATCAGAGAATCCAAATAATGGTTTCGAACAACTTCACCGCCACCAGAAAGATGTTGATGCTGGAGCCCTCTTTGTTCTCAAATCCAAAGGGTCTTGGATGCATAGTGGGTACCACTTGACAACATCGATAGTGGCACCGCCTCTCCTGAGCCTTCCTTATGCATTGACGTTCCTTGGATGGACGGCTGGGATGTTATGCTTAGTGATTGGAGCTTTGGTGACTTTCTATTCTTACAATCTAATCTCTAGGGTTCTAGAACACCACGCCCGGATGGGTAAGCGTCAACTACGCTTCAGAGACATGGCCACGGATATTTTAGGTCCAGGATGGGGTCGTTATTTTGTTGGCCCAATTCAGTTCGCAGTCTGTTATGGTGCCGTAGTAGCATGTACTCTCTTGGGAGGACAATGCATGAAGGCAATTTACTTGCTGTCAAATCCAAATGGGACCACGAAGCTTTACGAGTTTGTCATCATATTTGGATGCTTCATGCTGATTTTGGCTCAAATACCATCTTTCCACTCATTGAGGCACATTAATCTAGTGTCCTTGGTTTTGTGCTTAGCCTATAGTGCCGGAGCTACGGTTGGTTCCATATACATTGGAGAGTCATCAAAAGGACCAGAAAAGGATTATTCTTTGAAAGGTGATTCAGTGAATCGCTTATTCGGAATCTTCAATGCAATTGCTATCATTGCCACGACTTATGGAAATGGAATCATTCCAGAAATTCAGGCAACATTAGCACCACCTGTGAAAGGGAAGATGTTTAAAGGACTATGTGTTTGTTATCTTGTACTTATAGTCACATTCTTTAGCGTATCTGTATCCGGTTATTGGGCATTTGGCAACGAATCTGAAGGCCTCATCTTAAGCAACTTTGTGGACAATGGGAATCCTCTGGTGCCCAAGTGGTTTATTTACATGACCAACATTTTCACTATAACACAATTATCTGCAGTTGGTGTGGTTTATTTGCAACCAACAAATGAAGTGTTGGAGCAAACATTTGGAGACCCAAAAAGCCCCGAGTTCTCCAAACGCAACGTAATCCCCAGAGTGATTTCTCGGTCATTAGCCATTGCTATTTCAACCACTATAGCAGCCATGCTTCCATTTTTTGGAGACATAAACTCTCTTATAGGAGCTTTTGGCTTTATGCCACTTGACTTCATCTTGCCAGTGATTTTCTACAATTTGACATTTAAGCCATCTAAGCGAAGCTTTATTTTCTGGCTGAATGTGACTATTGCTGTTGCTTTCTCTGCATTGGGAGCTATAGCAGCAGTTGCAGCAGTTAGACAGATAGTTCTTGATGCTAAAAATTACCAATTGTTTGCTAATGTATGA 1377 0.4227 MGTQLPDEKSENPNNGFEQLHRHQKDVDAGALFVLKSKGSWMHSGYHLTTSIVAPPLLSLPYALTFLGWTAGMLCLVIGALVTFYSYNLISRVLEHHARMGKRQLRFRDMATDILGPGWGRYFVGPIQFAVCYGAVVACTLLGGQCMKAIYLLSNPNGTTKLYEFVIIFGCFMLILAQIPSFHSLRHINLVSLVLCLAYSAGATVGSIYIGESSKGPEKDYSLKGDSVNRLFGIFNAIAIIATTYGNGIIPEIQATLAPPVKGKMFKGLCVCYLVLIVTFFSVSVSGYWAFGNESEGLILSNFVDNGNPLVPKWFIYMTNIFTITQLSAVGVVYLQPTNEVLEQTFGDPKSPEFSKRNVIPRVISRSLAIAISTTIAAMLPFFGDINSLIGAFGFMPLDFILPVIFYNLTFKPSKRSFIFWLNVTIAVAFSALGAIAAVAAVRQIVLDAKNYQLFANV 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0608 458 Pfam Transmembrane amino acid transporter protein 38 442 IPR013057 -
Aed5g0608 458 PANTHER OS05G0424000 PROTEIN-RELATED 25 454 - -
Aed5g0608 458 PANTHER GABA TRANSPORTER 1 25 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0608 Aed-Chr5 4433229 4437750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0608 130 458 Organic Solute Cotransporters AT1G08230 65.559 7.95e-157 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0608 - - gmx:100791114 839.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0608 5 4433229 4437750 Aed5g0608 5 4433229 4437750 ECH