Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0597 ATGCAGCCGAACTTGTTTCCCTTTGGAAGCGTGCTGGGGAATCCGTTCATTTTCAACAATGTCGGCGAGGATTTGAGCGACGCTGGTGGTGGTGGAGGAGGGATCGAGAGCTCTAGGGTTTTCTTCTTGCTCCCGTTCTTCTTGCTCTCCCAGGGAGGAGCAATGGATTTGTCAAAAGTCGGCGAAAAAATCTTGAGCTCCGTTAGGTCCGCCAGATCTCTCGGATTGCTCCCTCCGGTTCTCGATCGCCCCGAGGTTCCAGCTCGAGCTGCTGCTGCAGCTGCTGTAGCTCGTGCTCTTGCAGGGTTACCTCCTCATCAGAGATATAGTTTTTCGTCTAGTTCGGAAGAACTGAGTTCAATATATGGAAGCAGACCTCAAGGCCAAGTAGTGGAGGAGCTGGAGGATGCATTCTATGAAGAGGACTTTGATCCAATTAGGCATGTTTTAGAGCACGTTCCAGCTGAAGAAAATGAGCTAACACATTTTGAAAAACAGGCTTCCCTTAGATTGGCACAACTGGATAGAGTAGCTGAGCGCTTATCTCGTCATGTTATGGAGCATCATGAAGTTATGGTGAAGGGGATGAATTTGGTCAGAGAATTGGAAAAAGACTTAAGAATTGCAAATGTCATCTGTATGAATGGAAGAAGACACTTGACATCATCTATGAATGAGGTTTCAAGGGATCTGATTGTGAATTCTTATTCTAAAAAGAAACAAGTTCTTCTGGACATGCTTCCAACCTTGACTGAACTTAGACGTGCTTTGGACATGCAATCAACACTTGAATCCCTTGTAGAGGAAGGGAATTACTGGAAGGCATTTCAAGTCCTATCTGAGTATTTGCAACTCTTAGATAGTTTGTCAGACCTTTCAGCAATACAAGAAATGAGTCGTGGTGTGGAGGTTTGGCTGGGAAGAACTTTACAGAAGCTGGATGCTCTTTTATTGGGAGTAATAGATGCATATGCATTAATTGGGGATACTGCCGGTCTTGCTGAAAAGATACAGAGTTTCTTCATGCAGGAGGTTATATCAGAAACACACTCTGTATTAAAGGCTTTTGTGCATGAGGTTGAGGAGGGACTTGCGCAAAATAGTAGGCTCACGTACAGCGATCTATGCCTTCGAATACCTGATTCAAAGTTCAGGCAATGCTTTCTGAGAACATTGGCTGTTCTCTTTGACCTTATGTGTTCATACCATGAAATTATGGATTTCCAGCTAGAAAGAAAGGACTCAGCAGCACAAACTTCAAATAAGTGCAACGAAGAGATTTCCTGTAGTCCAGGTGAGGCTCGGGAAGTTGATTCAGATGTAAGAGCCTGCAACAATTCTATGTCCAGTTCCGGAGATGTAATTCATGGCTCATCATCTAGGGAAGAATCTGCAACAATGAGCTCACTGACTGAAACTAGTGGTTCATCCCACAGTGATTCTCATGATCCAATTAAGGAGGCTGGAAAGGAGGACAGTGCAACATCAAGCATTGAGTCCCCTTGGTACCATCTTCGCAAAGAAGCTACAACAAATGTTTCACAGACCCTTCAAAGAGGACGCAGGAATCTGTGGCATCTCACTGCAAGTCGTGTGTCTGTATTGCTTTCTTCTGCTGCAGCCTGTACTGCTAGTATTCACCAATTCTTGAAAAATTATGAAGATCTCAGTGTCTTTATTTTGACTGGGGAAGCCTTTTGTGGAATTGAAGCAGTTGAATTTAGGCAGAAGCTAAAGGTTGTTTGTGAAAACTATTTCATAGCTTTTCATCGACAAAATGTGCATGCACTGAAAATGGTTTTGGAGAAAGAGACTTGGCTAAAATTACCTCCAGAGATGGTACAAATGATCAGCTTTGCAGGACTTATTGGTGATGGAGCACCGTTGATTTCTTTGTCCAGCGGTAAATCAACTAATGTCAGTGCAATCCATAGATCGATGAATACGGTTCACACTGGTGCAAGGAAGAATGGGTTTTCTCACTGGATTAAAAGTGGAAACCCTTTCTTGCAAAAATTACCAACCCCTAATGAAGGTCATGGTTACTCCCAACCTAATGGATCAGTTTGTGGTGATGGAAGTTCAACCAATAACTTTCATGATGATAGAACACCCAGAAAGAATGATTTCAATCAAACGAATGGTGCCAATTCTGTTTCAGAAGATGAAAACGAGGATCTTCTTGCTGACTTTATTGATGAAGACAGTCAACTACCAAGTCGAAATCGCTTGAGAACAGCTTTATCCAGAGTAAACCAAGATTGTGAAGAGTGGATTAAGTCTTCGCCAACATCTTTGAGTTCACCATTTGCACATGCTGAGTTGACACCTACACACCCTCCCAATACGAATTTTGGTCACTCCTCAGGGACTTCTTTGGGTCTCAAGGAAAGATGCATAGCTGTTGACACTATATCTCTTGTTGCTCGAATACTGAATAGATCTAAAGCTCATCTCCAATCAATGCTCTTGCAAAGTAATTCAACTATACTTGAGGATTTCTATGTTCATCTGATTCAAGATCAATTGTTGGATTATGGACTTGAAATTGTGGCGGAAACTCTTGTCGAAGGACTTTCACGGGTGAAGAGATGTAGTGATGAAGGACGAGCCCTTATGTCATTAGATCTGCAGGTTTTGATCAATGGGTTACAGCATTTTGTGGCACTGAATGTGAAGCCCAAGCTACAAATGGTTGAAGCTTTCATCAAGGCTTACTACCTTCCCGAGACAGAATATGTGCACTGGGCACGAGCACACCCTGAATACAGTAAAAGCCAGGTTGTTGGACTGGTGAACCTTGTTGCCACTATGAAAGGTTGGAAGAGGAAAACCAGGTTGGATATACTGGAAAAGATTGAATGA 2865 0.429 MQPNLFPFGSVLGNPFIFNNVGEDLSDAGGGGGGIESSRVFFLLPFFLLSQGGAMDLSKVGEKILSSVRSARSLGLLPPVLDRPEVPARAAAAAAVARALAGLPPHQRYSFSSSSEELSSIYGSRPQGQVVEELEDAFYEEDFDPIRHVLEHVPAEENELTHFEKQASLRLAQLDRVAERLSRHVMEHHEVMVKGMNLVRELEKDLRIANVICMNGRRHLTSSMNEVSRDLIVNSYSKKKQVLLDMLPTLTELRRALDMQSTLESLVEEGNYWKAFQVLSEYLQLLDSLSDLSAIQEMSRGVEVWLGRTLQKLDALLLGVIDAYALIGDTAGLAEKIQSFFMQEVISETHSVLKAFVHEVEEGLAQNSRLTYSDLCLRIPDSKFRQCFLRTLAVLFDLMCSYHEIMDFQLERKDSAAQTSNKCNEEISCSPGEAREVDSDVRACNNSMSSSGDVIHGSSSREESATMSSLTETSGSSHSDSHDPIKEAGKEDSATSSIESPWYHLRKEATTNVSQTLQRGRRNLWHLTASRVSVLLSSAAACTASIHQFLKNYEDLSVFILTGEAFCGIEAVEFRQKLKVVCENYFIAFHRQNVHALKMVLEKETWLKLPPEMVQMISFAGLIGDGAPLISLSSGKSTNVSAIHRSMNTVHTGARKNGFSHWIKSGNPFLQKLPTPNEGHGYSQPNGSVCGDGSSTNNFHDDRTPRKNDFNQTNGANSVSEDENEDLLADFIDEDSQLPSRNRLRTALSRVNQDCEEWIKSSPTSLSSPFAHAELTPTHPPNTNFGHSSGTSLGLKERCIAVDTISLVARILNRSKAHLQSMLLQSNSTILEDFYVHLIQDQLLDYGLEIVAETLVEGLSRVKRCSDEGRALMSLDLQVLINGLQHFVALNVKPKLQMVEAFIKAYYLPETEYVHWARAHPEYSKSQVVGLVNLVATMKGWKRKTRLDILEKIE 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0597 954 MobiDBLite consensus disorder prediction 479 493 - -
Aed5g0597 954 MobiDBLite consensus disorder prediction 447 497 - -
Aed5g0597 954 Pfam Vacuolar-sorting protein 54, of GARP complex 131 408 IPR019515 -
Aed5g0597 954 MobiDBLite consensus disorder prediction 675 723 - -
Aed5g0597 954 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN-RELATED 743 839 - -
Aed5g0597 954 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN-RELATED 839 954 - -
Aed5g0597 954 MobiDBLite consensus disorder prediction 677 698 - -
Aed5g0597 954 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN-RELATED 26 741 - -
Aed5g0597 954 MobiDBLite consensus disorder prediction 447 478 - -
Aed5g0597 954 Pfam Protein of unknown function C-terminus (DUF2451) 839 954 IPR019514 -
Aed5g0597 954 PANTHER UNCHARACTERIZED 743 839 IPR040047 GO:0032456|GO:0042147|GO:1990745
Aed5g0597 954 PANTHER UNCHARACTERIZED 839 954 IPR040047 GO:0032456|GO:0042147|GO:1990745
Aed5g0597 954 PANTHER UNCHARACTERIZED 26 741 IPR040047 GO:0032456|GO:0042147|GO:1990745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0597 K23288 - gmx:100788476 1280
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0597 5 4334605 4352375 Aed5g0597 5 4334605 4352375 ECH