Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0596 ATGGAAAAGGTTCCTCTTTCTGTCTCCATTCTCCTGTTCATTGCTCTGCTTTTTCACGGTGGAAAGGTGTTAGCTTTCAAGAGCCAAGATGGATCAGAGGAATGGGGTTACGTTCAAGTCAGACCCAAAGCGCACATGTTTTGGTGGCTTTACAGAAGTCCATATAGAGTGGAAGATTCTTCTAAGCCATGGCCAATTATTCTCTGGTTGCAAGGAGGACCTGGTGCTTCAGGAGTTGGGATTGGAAATTTTGAGGAGGTTGGGCCATTAGACACAAGCTTGAAGCCACGGAATTCCACATGGTTGAAAAAAGCAGATCTCTTGTTTGTGGACAATCCAGTTGGAACCGGGTACAGTTTTGTGGAGGATAAGAAACTCTTTGTGAAAACAGATGATGAGGCAGCCACCGACTTGACTACATTGTTGATTGAATTATTCAATAGGAATGAGAAACTGCAAAAGAGTCCTCTGTTCATCGTGGCAGAGTCATATGGTGTGGCATTAGGAGACAGTTGGATCTCCCCGGAAGATTTTGTGTTCTCATGGGGTCCTCTCCTTAAAGACCTCTCACGACTTGACGATAATGGACTGCAAAAATCAAACAGTATAGCTGAGAGGATCAAACAGCAAATTGTGGATGGTAAATTTGCTGATGCCACTGACTCATGGAGTGAACTTGAGAATGTGATATCCGCCAGCAGCAACAATGTGGACTTCTACAATTTATTGGAGGATTCGGGAAGTGGTGACATAGCAGCAACAATGGAGTTGGGGTTATATGAAAAGTTATCAATGAAGAAGTACTCTAGGTATCTTACTTCCATGAGATCAAGATCATCTCCTGGTGGTGGTAATGATCTTGACACGTTACTAAACGGTGTCATAAAGAAAAAGTTAAAGATCATCCCTGAGAATGTCACATGGGGAGGGCAGTCTGGTGAAGTTTTCGACTCTCTTGCAGGTGATTTTATGAGACCAAGAATTAATGAGGTTGATGAACTGCTGACAAAAGGGGTCAATGTGACTGTGTACAATGGACAAATTGATCTGATTTGTTCAACTAAGGGGACTGAGGCTTGGGTTCATAAATTAAAGTGGGAAGGACTTCAAAATTTCTTGGAAAAAGGTAGAACACCTCTCTACTGTGGAAGTGACAAATCGACAACCAAAGGCTTTGTTAAGTCATATAAAAACCTATTCTTCTTTTGGATCCTCAAAGCTGGCCATTTTGTTCCCTCTGATCAACCCTGCGTGGCACTAGACATGGTTGGTGCTATTACACAGTCACCAGCAGCCACTTGA 1302 0.4286 MEKVPLSVSILLFIALLFHGGKVLAFKSQDGSEEWGYVQVRPKAHMFWWLYRSPYRVEDSSKPWPIILWLQGGPGASGVGIGNFEEVGPLDTSLKPRNSTWLKKADLLFVDNPVGTGYSFVEDKKLFVKTDDEAATDLTTLLIELFNRNEKLQKSPLFIVAESYGVALGDSWISPEDFVFSWGPLLKDLSRLDDNGLQKSNSIAERIKQQIVDGKFADATDSWSELENVISASSNNVDFYNLLEDSGSGDIAATMELGLYEKLSMKKYSRYLTSMRSRSSPGGGNDLDTLLNGVIKKKLKIIPENVTWGGQSGEVFDSLAGDFMRPRINEVDELLTKGVNVTVYNGQIDLICSTKGTEAWVHKLKWEGLQNFLEKGRTPLYCGSDKSTTKGFVKSYKNLFFFWILKAGHFVPSDQPCVALDMVGAITQSPAAT 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0596 433 Pfam Serine carboxypeptidase 30 165 IPR001563 GO:0004185|GO:0006508
Aed5g0596 433 Gene3D alpha/beta hydrolase 19 432 IPR029058 -
Aed5g0596 433 PANTHER CARBOXYPEPTIDASE 7 165 - -
Aed5g0596 433 PANTHER CARBOXYPEPTIDASE 165 430 - -
Aed5g0596 433 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 120 IPR001563 GO:0004185|GO:0006508
Aed5g0596 433 PRINTS Carboxypeptidase C serine protease (S10) family signature 97 109 IPR001563 GO:0004185|GO:0006508
Aed5g0596 433 PRINTS Carboxypeptidase C serine protease (S10) family signature 145 170 IPR001563 GO:0004185|GO:0006508
Aed5g0596 433 PRINTS Carboxypeptidase C serine protease (S10) family signature 399 412 IPR001563 GO:0004185|GO:0006508
Aed5g0596 433 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 7 165 IPR001563 GO:0004185|GO:0006508
Aed5g0596 433 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 165 430 IPR001563 GO:0004185|GO:0006508
Aed5g0596 433 SUPERFAMILY alpha/beta-Hydrolases 25 429 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0596 Aed-Chr5 4327497 4333402 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0596 K09646 - gmx:100808412 778.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0596 5 4327497 4333402 Aed5g0596 5 4327497 4333402 ECH