Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0593 ATGACAGTTCCTCTCTCCAGAACTTGGCATTCACTTTTCACCCCCACGTATTTACTTGGTTCCTATGCATTTGACACCTGGTGCCACTCGTCAACCTATAGAACCCCCTCAAGGTTTAGCTTATTCTATCAGCATACTAATAAAAACGCTAGCTTGAAGGGTAAGAAAGAAAGATTAATAGTGAATATGGCTCCAAAACGTGCTGAGAAGTTGATGGTCAAATCCACCAAGAAGGTTGTGGAATCAAGTGTGCAAGTTTCGGTTTTAGGCAAAAAAAGACTAAGCCGGGGAAAAAAACAAGGGCATTTGGTGATCAACATTCCCATTGAAGAAGTGAGTCCTGAAGAAGCCCAAAAGGAGTCACATAACTCTGGCATCACCACTGAAGAAGAGGAAGAGCATGAAGAAGAAGTGATAAAGGGCAAGAAGGAGAAAAAAAGGGGGAGAAAAAAGAGGAGGAGAAGTGTTGAAGGGTACCAGAGTTATGTGTATAGGGTGCTGAAGCAAGTGCACCCTGAAATGGGAATCTCTTATAAGTGCATGACTGTTCTGAACAACTTGATGAATGACATGTTTGAGAGGCTTGCTTCTGAGGCTGCTAAGCTCAAGGACTACACTGGACACGTCACTTTGTCTTCAAGAGAGATTCAAGGAGCAGTCAGGCTTGTTTTGCCAGGGGAGCTTGGGAAGCATGCAATTGCTGAAGGTGTCAAAGCTGTTAACAACTACACATCCTATCATGTTTAA 747 0.4324 MTVPLSRTWHSLFTPTYLLGSYAFDTWCHSSTYRTPSRFSLFYQHTNKNASLKGKKERLIVNMAPKRAEKLMVKSTKKVVESSVQVSVLGKKRLSRGKKQGHLVINIPIEEVSPEEAQKESHNSGITTEEEEEHEEEVIKGKKEKKRGRKKRRRSVEGYQSYVYRVLKQVHPEMGISYKCMTVLNNLMNDMFERLASEAAKLKDYTGHVTLSSREIQGAVRLVLPGELGKHAIAEGVKAVNNYTSYHV 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0593 248 MobiDBLite consensus disorder prediction 113 143 - -
Aed5g0593 248 SUPERFAMILY Histone-fold 140 245 IPR009072 GO:0046982
Aed5g0593 248 PRINTS Histone H2B signature 200 217 IPR000558 GO:0000786|GO:0003677|GO:0030527
Aed5g0593 248 PRINTS Histone H2B signature 159 177 IPR000558 GO:0000786|GO:0003677|GO:0030527
Aed5g0593 248 PRINTS Histone H2B signature 217 230 IPR000558 GO:0000786|GO:0003677|GO:0030527
Aed5g0593 248 PRINTS Histone H2B signature 178 198 IPR000558 GO:0000786|GO:0003677|GO:0030527
Aed5g0593 248 PRINTS Histone H2B signature 230 243 IPR000558 GO:0000786|GO:0003677|GO:0030527
Aed5g0593 248 SMART h2b3 149 245 IPR000558 GO:0000786|GO:0003677|GO:0030527
Aed5g0593 248 MobiDBLite consensus disorder prediction 113 154 - -
Aed5g0593 248 Gene3D Histone, subunit A 117 246 IPR009072 GO:0046982
Aed5g0593 248 PANTHER HISTONE H2B 127 246 IPR000558 GO:0000786|GO:0003677|GO:0030527
Aed5g0593 248 Pfam Core histone H2A/H2B/H3/H4 120 222 IPR007125 GO:0003677
Aed5g0593 248 PANTHER HISTONE H2B.2 127 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0593 Aed-Chr5 4314430 4315176 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0593 K11252 - gmx:100786873 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0593 5 4314430 4315176 Aed5g0593 5 4314430 4315176 ECH