Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0587 ATGGCACTCCCTCACTCCATCTCTGCCTTAGCCACCACACTCACACTTTCCTCCCCAATAAGCAAACCCCACAAAGTTAACATCTTTCCCCTTCTCTCGAACCAAAAGACACAATTTTTAACGAAACAAACGCGACTCAGAAGCAGAAGAAGCCTCTCCCTGACCCCTGCACGCGTGGCGGCGCCACCCTCAACGGTTGAAGCCGATCAATCGTTCCCGGAGACCGAAAAGGGGGAAACTGAGGAAGAGTTTAACGAGGAGAGCTCTTCCTCAAAATTCTCTTGGAGGGATCACTGGTACCCTGTTTCGTTAATTGAAGATCTGAACCCTCTCTTGCCCACACCATTTCAGCTTCTGGGTCGCGAAATCGTGCTCTGGTACGACAAGTCCATTTCCCAATGGGTTGCTTTTGATGACAAATGCCCCCATCGTCTTGCCCCTTTATCTGAAGGAAGGATCGATGAGGATGGGAAGTTGCAGTGTTCTTATCATGGGTGGTCTTTTGATGGGTGCGGATCTTGTGTTAAGATTCCTCAGGCTGCATCAGAAGGCCCCGAAGCACGTGCCATTGGATCTCCTAAAGCGTGTGCCACTAGGTTCCCTACCTTGGTGTCTCAGGGCTTGCTCTTTGTTTGGCCTGATGAGAAGGGTTGGGAAAAAGCTAAGGCTTCCAAGCCTCCAATGTTGCCTGATGACTTTGACGAACCGGAGTTTGCAACGGTCAACATTCAGCGTGATCTGTTCTATGGTTACGATACTCTCATGGAGAATGTCTCTGATCCCTCTCACATTGAGTTTGCTCATCACAAGGTCACAGGAAGAAGAGACAGAGCCAAGCCTCTGCCATTCAAGATGGATTCTCGTGGTTCATGGGGCTTCTCTGGAGCTAATGAAGGGAACCCACAGATCAGTGCCAAGTTTGTTGCACCATGTTATATGATAAACAAGATTGTGATTGATGCCAAACTCCCTGGAGTTGGTGACCAGAAATGGGTAGTATGGATATGTTCCTTCAATGTCCCCATGGCACCTGGTAAGACTCGCTCCATTGTTTGCAGTGCTCGAAACTTCTTCCAGTTCTCAGTGCCAGGGCCTGCCTGGTGGCAAGTCGTTCCTAGATGGTATGAGCATTGGACTTCAAACAAGGTATATGATGGAGACATGATTGTCCTTCAAGGCCAAGAGAAAATCTTCCTTTCAGAAACCAAGAACGGTGGCGACATTAACAAACAGTACACAAGCATCACCTTCACACCAACACAGGCAGATCGCTTTGTCTTGGCATTTCGAAACTGGCTGAGGCGACATGGCAATGGCCAACCAGAATGGTTTGGCAACAGCAGCGACCAGCCATTGCCATCAACAGTTTTATCAAAACGTCAGATGTTGGATAGATTTGAACAGCATACTCTAAAGTGTTCATCATGTAAAGCAGCATATGAAGGATTCCAAACATGGCAGAAAATTCTAATTGGTGCAACAGTTGTGTTTTGTTCAACATCAGGGATCCCATCAGATGTCAAGTTGCGTGTACTCTTGGCTGGACTTGCAATTGTCAGTGCAGCCATAGCTTTTGCACTAAACCAACTCCAAAAGAATTTTGAATTCGTGGATTACGTGCATGCCGAAATCGATTAA 1638 0.4737 MALPHSISALATTLTLSSPISKPHKVNIFPLLSNQKTQFLTKQTRLRSRRSLSLTPARVAAPPSTVEADQSFPETEKGETEEEFNEESSSSKFSWRDHWYPVSLIEDLNPLLPTPFQLLGREIVLWYDKSISQWVAFDDKCPHRLAPLSEGRIDEDGKLQCSYHGWSFDGCGSCVKIPQAASEGPEARAIGSPKACATRFPTLVSQGLLFVWPDEKGWEKAKASKPPMLPDDFDEPEFATVNIQRDLFYGYDTLMENVSDPSHIEFAHHKVTGRRDRAKPLPFKMDSRGSWGFSGANEGNPQISAKFVAPCYMINKIVIDAKLPGVGDQKWVVWICSFNVPMAPGKTRSIVCSARNFFQFSVPGPAWWQVVPRWYEHWTSNKVYDGDMIVLQGQEKIFLSETKNGGDINKQYTSITFTPTQADRFVLAFRNWLRRHGNGQPEWFGNSSDQPLPSTVLSKRQMLDRFEQHTLKCSSCKAAYEGFQTWQKILIGATVVFCSTSGIPSDVKLRVLLAGLAIVSAAIAFALNQLQKNFEFVDYVHAEID 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0587 545 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 32 545 - -
Aed5g0587 545 Gene3D - 237 440 - -
Aed5g0587 545 MobiDBLite consensus disorder prediction 72 89 - -
Aed5g0587 545 SUPERFAMILY ISP domain 93 215 IPR036922 GO:0051537
Aed5g0587 545 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 99 211 IPR017941 GO:0051537
Aed5g0587 545 SUPERFAMILY Bet v1-like 206 441 - -
Aed5g0587 545 Pfam Pheophorbide a oxygenase 307 402 IPR013626 GO:0010277
Aed5g0587 545 MobiDBLite consensus disorder prediction 50 89 - -
Aed5g0587 545 Gene3D - 94 236 IPR036922 GO:0051537
Aed5g0587 545 PANTHER PHEOPHORBIDE A OXYGENASE, CHLOROPLASTIC 32 545 - -
Aed5g0587 545 Pfam Rieske [2Fe-2S] domain 98 181 IPR017941 GO:0051537
Aed5g0587 545 CDD Rieske_RO_Alpha_PaO 92 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0587 Aed-Chr5 4278359 4281904 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0587 K13071 - gmx:778121 1043.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0587 5 4278359 4281904 Aed5g0587 5 4278359 4281904 ECH