Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0585 ATGGCGTCAGCATTATCTTCTCTCTCCTCCACCTCTTCTTCACTGTTGCAGCACAGTTTCACCGGAAACTCGAAGGCTCCTACTCAATTCCCCAACAAAAATGCGCGCTTTTTGGTCGTCGCTCAAAAGAAGGCAAAGAAACTTCGAAAGATAATTTTGAAGGAAGATGTGACTGATGTGGGAAAGCAAGGGCAACTTCTTGATGTAAAGGCTGGCTTTTACAGAAATTACCTGCTTCCTATGGGAAAGGCACAAATCGTTACTCCCCAGCTACTCAAGGAAATGAAGGTAGAAGAGGAAAGAATTGAAGCTGAGAAAAGACGGGTAAAAGAAGAGGCACAGCAACTTGCTCTAATTTTTGAAACTGTTGGGGCTTTCAAGGTGAAGCGTAAAGGTGGTAAAGGAAAACAAATTTTTGGGAGTGTCACTGCTCAAGATCTAGTTGACATAATCAAGGCACAACTTCAAAGGGAGGTGGACAAGAGAATTGTTGATCTTCCAGAGATCAGGGAAACAGGAGAATATATTGCAGAGTTAAAGCTTCACCCTGAAGTTACAGCTAGAGTGAGGGTGAATGTTTTTGCTAACTAA 591 0.4264 MASALSSLSSTSSSLLQHSFTGNSKAPTQFPNKNARFLVVAQKKAKKLRKIILKEDVTDVGKQGQLLDVKAGFYRNYLLPMGKAQIVTPQLLKEMKVEEERIEAEKRRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQREVDKRIVDLPEIRETGEYIAELKLHPEVTARVRVNVFAN 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0585 196 Pfam Ribosomal protein L9, C-terminal domain 111 194 IPR020069 -
Aed5g0585 196 Gene3D - 109 196 IPR036791 -
Aed5g0585 196 Coils Coil 92 119 - -
Aed5g0585 196 Gene3D - 50 108 IPR036935 -
Aed5g0585 196 ProSitePatterns Ribosomal protein L9 signature. 61 88 IPR020070 -
Aed5g0585 196 PANTHER 50S RIBOSOMAL PROTEIN L9, CHLOROPLASTIC 1 196 - -
Aed5g0585 196 Pfam Ribosomal protein L9, N-terminal domain 50 95 IPR020070 -
Aed5g0585 196 SUPERFAMILY Ribosomal protein L9 C-domain 108 195 IPR036791 -
Aed5g0585 196 SUPERFAMILY L9 N-domain-like 50 105 IPR009027 -
Aed5g0585 196 TIGRFAM L9: ribosomal protein bL9 50 195 IPR020594 GO:0003735|GO:0005840|GO:0006412
Aed5g0585 196 Hamap 50S ribosomal protein L9 [rplI]. 49 196 IPR020594 GO:0003735|GO:0005840|GO:0006412
Aed5g0585 196 PANTHER 50S RIBOSOMAL PROTEIN L9 1 196 IPR000244 GO:0003735|GO:0005840|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0585 K02939 - gmx:100500390 338.191