Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0583 ATGCAATTAGCAATGGCGCCCAACGCTGTCGTTTCGCCGTCGCCTTTCCAACCTCATCCTCTTCTCCGGTCATCCTTCTCCGGCGTCTCTTTTAAGCTCACTCCCCAATCCCTAATGCTTTCACGCTCGAAGCCCCTCACCGTCGTCGCCGCCGCCGCCAAGAAGGCCGTCGCCGTCCTCAAGGGTACCTCCGCCGTCGAAGGCGTCGCTACTCTCATCCAAGAAGACGATGGCCCGACAACAGTTTCTGTTCGCATTACTGGCCTTACTCCAGGGCTTCATGGTTTTCACCTACATGAGTATGGTGATACCACAAATGGGTGTATTTCAACAGGAGCACATTTTAATCCTAATAAATTGACACATGGTGCTCCTGAGGATGAAGTCCGTCATGCGGGTGACCTGGGAAACATAGTTGCTAATGCAGAAGGGGTTGCAGAGGCTACAATTGTGGATACTCAGATACCACTCTCTGGCCCCAATTCAGTAGTTGGAAGAGCTTTGGTGGTTCATGAGCTTGAGGATGACCTTGGAAAGGGTGGGCACGAACTCAGTTTGACAACTGGCAATGCTGGTGGAAGATTAGCATGTGGTGTGGTTGGTTTGACTCCAGCATAA 618 0.5178 MQLAMAPNAVVSPSPFQPHPLLRSSFSGVSFKLTPQSLMLSRSKPLTVVAAAAKKAVAVLKGTSAVEGVATLIQEDDGPTTVSVRITGLTPGLHGFHLHEYGDTTNGCISTGAHFNPNKLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDTQIPLSGPNSVVGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPA 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0583 205 CDD Cu-Zn_Superoxide_Dismutase 62 197 IPR001424 GO:0006801|GO:0046872
Aed5g0583 205 Pfam Copper/zinc superoxide dismutase (SODC) 66 200 IPR001424 GO:0006801|GO:0046872
Aed5g0583 205 Gene3D Superoxide dismutase, copper/zinc binding domain 51 204 IPR036423 GO:0006801|GO:0046872
Aed5g0583 205 ProSitePatterns Copper/Zinc superoxide dismutase signature 1. 95 105 IPR018152 -
Aed5g0583 205 PANTHER SUPEROXIDE DISMUTASE CU-ZN -RELATED 52 203 IPR024134 -
Aed5g0583 205 PRINTS Cu-Zn-superoxide dismutase family signature 131 140 IPR001424 GO:0006801|GO:0046872
Aed5g0583 205 PRINTS Cu-Zn-superoxide dismutase family signature 150 172 IPR001424 GO:0006801|GO:0046872
Aed5g0583 205 PRINTS Cu-Zn-superoxide dismutase family signature 175 201 IPR001424 GO:0006801|GO:0046872
Aed5g0583 205 PRINTS Cu-Zn-superoxide dismutase family signature 95 117 IPR001424 GO:0006801|GO:0046872
Aed5g0583 205 PANTHER SUPEROXIDE DISMUTASE [CU-ZN] 52 203 - -
Aed5g0583 205 ProSitePatterns Copper/Zinc superoxide dismutase signature 2. 189 200 IPR018152 -
Aed5g0583 205 SUPERFAMILY Cu,Zn superoxide dismutase-like 55 202 IPR036423 GO:0006801|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0583 Aed-Chr5 4246026 4249485 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0583 K04565 - gmx:100815376 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0583 5 4246026 4249485 Aed5g0583 5 4246026 4249485 ECH